Burkholderia cenocepacia H111: I35_3238
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Entry
I35_3238 CDS
T03804
Symbol
trmE
Name
(GenBank) GTPase and tRNA-U34 5-formylation enzyme TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
bceo
Burkholderia cenocepacia H111
Brite
KEGG Orthology (KO) [BR:
bceo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bceo03016
]
I35_3238 (trmE)
Transfer RNA biogenesis [BR:
bceo03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
I35_3238 (trmE)
Prokaryotic type
Methyltransferases
I35_3238 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
AIG1
GTP_EFTU
Ras
Roc
DUF374
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CDN61761
LinkDB
All DBs
Position
1:complement(3488888..3490282)
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AA seq
464 aa
AA seq
DB search
MLATDSDPIVAIATAAGRGGIGVVRVSFGRGGEAAALPLIDALCGQKLAPRHASYVPFLD
AHGAPLDRGIALYFPAPHSYTGEHVLELQGHGGPIVMQLLLQRCLDAGRGFGLRLAEPGE
FTRRAFLNDKLDLAQAEAVADLIEASTEAAARSAGRSLDGAFSRQIHALVDDVITLRMLV
EATLDFPEEEIDFLEAADARGKLAKIRAQLAHVLGDARQGALLREGLSVVLAGQPNVGKS
SLLNALAGAELAIVTPIAGTTRDKVAQTIQVEGIPLHIIDTAGLRETEDEVERIGIARTW
SEIERADVVLHLLDSRTGMTADDETIAARFPAGVPVVRVLNKTDLTGVPACVEHPAAEGD
LTEVHLSAKRGDGIDMLRAELLRIAGWQAGAEGVYLARERHLIALRAAQEHLAQAADHAE
QRAQSLDLFAEELRLAQEQLNAITGEFTSDDLLGVIFSRFCIGK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgctcgctaccgattccgatccgatcgtcgctattgccaccgctgccggccggggcggc
atcggggtcgtccgcgtgtcgttcgggcgcggcggcgaggcggccgcgctgccgctgatc
gacgcgttgtgcgggcagaagctcgcgccgcgtcatgcgagctacgtgccgtttctcgac
gcgcacggcgcgccgctcgaccgcgggatcgcgctgtatttcccggcgccgcattcgtac
accggcgagcacgtgctcgagctgcaggggcatggcgggccgatcgtgatgcagctgctg
ctgcagcgctgcctggatgcggggcgcggcttcgggctgcggctcgcggaaccgggcgaa
ttcacgcggcgcgcgttcctgaacgacaagctcgacctcgcgcaggccgaggccgtcgcc
gacctgatcgaggcgagcaccgaggccgcggcgcgctcggccgggcgttcgctcgacggc
gcgttctcgcggcagatccatgcgctcgtcgacgacgtgatcacgctgcggatgctggtc
gaggcgacgctcgattttccggaggaggaaatcgacttcctcgaagcggccgacgcgcgc
ggcaagctcgcgaagatccgcgcgcaactcgcgcacgtgctcggcgatgcgcgtcagggc
gcgttgttgcgcgaagggctgtcggtcgtgctcgcggggcagccgaacgtcggcaagtcg
tcgctgctgaatgcgctggcgggcgccgagctggcgatcgtcacgccgattgccggcacg
acgcgcgacaaggtggcgcagacgatccaggtcgaagggattccgctgcacatcatcgat
acggccgggttgcgcgagacggaggacgaagtcgaacggatcggcattgcgcgcacgtgg
agcgagatcgagcgcgcggacgtcgtgctgcatctgctcgattcgcgcacggggatgacg
gcggacgacgaaacgatcgccgcgcggtttccggccggcgtgccggtggtgcgcgtgctg
aacaagacggacctgactggcgtgccggcatgcgtcgagcatccggcggcggaaggcgat
ctgaccgaggtacatctgtcggcgaaacgcggcgacgggatcgacatgctgcgcgcggag
ctgctgcggatcgcagggtggcaggcgggggccgagggtgtgtatctcgcgcgcgagcgg
catctgatcgcgctgcgggccgcgcaggaacatctcgcgcaggcggcggatcatgcggag
cagcgtgcgcagtcgctcgatctgtttgccgaagagctgcggctcgcgcaggagcagctc
aatgcgattaccggggagttcacgtcggatgatctgctgggggtgattttcagcaggttt
tgtatcggcaagtga
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