Burkholderia cenocepacia H111: I35_4172
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Entry
I35_4172 CDS
T03804
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
bceo
Burkholderia cenocepacia H111
Brite
KEGG Orthology (KO) [BR:
bceo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bceo03009
]
I35_4172 (dbpA)
Enzymes [BR:
bceo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
I35_4172 (dbpA)
Ribosome biogenesis [BR:
bceo03009
]
Prokaryotic type
rRNA helicases
I35_4172 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
AAA_22
P-loop_SecA
YjeF_N
Motif
Other DBs
NCBI-ProteinID:
CDN62008
LinkDB
All DBs
Position
2:complement(205121..206518)
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AA seq
465 aa
AA seq
DB search
MTQPTATPFSALPLTPATLANLAQLGYVDMTPIQAASLPIALAGQDLIAQAKTGSGKTAA
FSLALLARLDARRFDVQAMILCPTRELADQVAQEVRRLARAEENVKVLTLCGGTPMRPQA
QSLEHGAHIVVGTPGRIMDHLDRGNLKLDALNTLVLDEADRMLDMGFFDDIAKVARMCPT
TRQTLLFSATYPDGIAKLSQQFLRNPKEIKLAERHDDSKIRQRFYEVTEDERLHAVGQLL
NHYRPVSTIAFCNTKQQCRDLLDVLHAQGFHALALHGELDQRERDQVLIQFANRSCSVLV
ATDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRADQDGWALSLASMDEMGRVGAI
EQAQKREVEWHPLAELKPADDSVLLPPMETLQILGGRKDKIRPGDVLGALTGDAGFDGKQ
IGKINVTEFSTYVAIERGVARDALRKLNAGKIKGKRVKVRLMDEE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
ttgacccaaccgaccgccacgccgttcagcgcgctgccgctgacgcccgccacgctcgcg
aacctcgcgcagctcggctatgtcgacatgacgccgatccaggccgcgagcctgccgatc
gcgctggccggccaggacctgatcgcgcaggcgaagacaggcagcggcaagaccgccgcg
ttctcgctcgcgctgctcgcgcgcctcgatgcgcgccgtttcgacgtgcaggcgatgatc
ctgtgcccgacgcgcgagctggccgaccaggtcgcgcaggaagtgcgccgcctcgcgcgc
gccgaggagaacgtgaaggtgctgacgctgtgcggcggcacgccgatgcgcccgcaagcg
cagagcctcgagcacggcgcgcatatcgtcgtcggcacgccgggccgcatcatggatcac
ctcgatcgcggcaacctgaagctcgacgcgctgaatacgctggtgctcgacgaagctgac
cggatgctcgacatgggcttcttcgacgacatcgcgaaggtcgcgcggatgtgtccgacg
acgcgccagacgctgctgttctccgcgacctatccggacggcatcgcgaagctgagccag
cagttcctgcgcaatccgaaggaaatcaagctcgcggaacgccacgacgacagcaagatc
cgccagcgcttctatgaagtgaccgaggacgagcggctgcatgcggtcggccagttgctg
aaccactatcggccggtgagcacgatcgcgttctgcaacaccaagcagcagtgccgcgac
ctgctcgacgtgctgcacgcgcaaggcttccatgcgctcgcgctgcacggcgaactcgac
cagcgcgaacgcgaccaggtgctgatccagttcgcgaaccgcagctgctcggtgctggtc
gcgaccgacgtcgccgcgcgcgggctcgacatcgcgcagctcgaagcggtgatcaacgtc
gacgtgacgcccgaccccgaagtgcacgtacaccgcatcggccgcaccggccgcgcggat
caggacggctgggcgctgagcctcgcgagcatggacgagatgggccgcgtcggcgcgatc
gaacaggcgcagaagcgcgaggtcgaatggcatcccctcgccgagctgaagccggcggac
gacagcgtgctgctgccgccgatggaaacgctgcagatcctcggcgggcgcaaggacaag
atccgcccgggcgacgtgctcggcgcgctgaccggcgacgccgggttcgacggcaagcag
atcggcaagatcaacgtgaccgagttctcgacctatgtcgcgatcgagcgcggcgtcgca
cgcgacgcgctgcgcaagctcaatgcggggaagatcaagggcaagcgcgtcaaggtccgg
ttgatggacgaggagtaa
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