Burkholderia cenocepacia H111: I35_5370
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Entry
I35_5370 CDS
T03804
Name
(GenBank) DinG family ATP-dependent helicase CPE1197
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bceo
Burkholderia cenocepacia H111
Pathway
bceo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bceo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
I35_5370
09124 Replication and repair
03420 Nucleotide excision repair
I35_5370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bceo03021
]
I35_5370
03036 Chromosome and associated proteins [BR:
bceo03036
]
I35_5370
03400 DNA repair and recombination proteins [BR:
bceo03400
]
I35_5370
Enzymes [BR:
bceo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
I35_5370
Transcription machinery [BR:
bceo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
I35_5370
Chromosome and associated proteins [BR:
bceo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
I35_5370
DNA repair and recombination proteins [BR:
bceo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
I35_5370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
GlgS
Motif
Other DBs
NCBI-ProteinID:
CDN63206
LinkDB
All DBs
Position
2:1546820..1549120
Genome browser
AA seq
766 aa
AA seq
DB search
MSYVVAVRAMCEFTARRGDLDLRFTPAPTALEGIAGHGAVTSKRGARYETEIALTGTWGT
LTVRGRADGYDPVANRLEEIKTYRGSLDAMPANHRALHWAQAKVYAHLMCAARDLAEIDV
ALVYFDIVSERETVLTETLDAATLATFFAEQCACFVGWAERETAHRAARDAALRALAFPH
GQFRSGQRELAVAVYRAARDEQCLMAQAPTGIGKTLGTVFPLLKACGEGELDHVFFLTAK
TPGRALALEAATTLGTSTSALPLRVLELVARDKACEHPDNACHGESCPLAKGFYDRLPAA
RDAAIEAGLLDRDTVRTAALAHDVCPYYLAQELARWSDMVIGDYNYYYDGSAMLHTLAQQ
NQWRVGVLVDEAHNLLDRARKMYSASLDPFAFAAAREAAPAALRKAFDRLARAWGTLNRA
QAERYAAYPDVPGTIVSAVQNLVAAIGEHLTDAPRANGDALLRFHFEAIQFGVLAEAFDS
ASIFDATLHGEPMPRQPVLDGVAAAGRRRRVQSTLCVRNVIPAGFLAPRYAAARATVLFS
GTLSPFHFYRDTLGLPGDTGWLDVDGPFRAEQLTVRVASHVSTRWRDRDRSLEPIADLIA
AQYATRPGNYLGFLSSFDYLGRVVALMQTRHPDVPVWAQAPGMAESERDAFLARFDAGGR
GVGFAVLGGAFSEGVDLVGERLIGAFIATLGLPQVNDVNEQMRRAMDARFGNGYDYMYLY
PGLQKVVQAAGRVIRTEHDEGVVHLIDDRYRRREVRNLLPRWWRIG
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgtcgtcgcggtgcgggcgatgtgcgagttcaccgcgcggcgcggcgatctc
gacctgcgcttcacgcccgcgccgaccgcgctcgaaggcattgccgggcacggcgcggtc
acgtcgaagcgcggcgcgcgctacgaaaccgaaatcgcgctgaccggcacgtggggcacg
ctcaccgtgcgcggccgcgcggacggctacgatcccgtggcgaaccggctcgaggaaatc
aagacctatcgcggcagcctcgacgcaatgccggccaaccatcgcgcgctgcactgggcg
caggcgaaggtctatgcgcacctgatgtgcgccgcgcgcgatctcgcggaaatcgacgtc
gcgctcgtgtatttcgacatcgtgtccgagcgcgagaccgtgctgacggaaacgctcgat
gccgccacgctcgcgacgttcttcgccgagcagtgcgcgtgcttcgtcggctgggccgaa
cgcgagacggcccatcgcgccgcgcgcgacgcggcgctgcgtgcgctcgcgtttccgcac
ggacagttccgcagcggccagcgcgaactggcggtggccgtctatcgcgcggcacgcgac
gagcagtgcctgatggcgcaagcgccgaccggcatcggcaagacgctcggcaccgtgttc
ccgctgctgaaggcatgcggcgagggcgagctcgaccacgtgtttttcctgaccgcgaaa
acacccggccgcgcgctcgcgctcgaagcggcaacgacgctcggcaccagcacgtccgcg
ctgccgctgcgcgtgctggaactcgtcgcgcgcgacaaggcgtgcgagcatccggacaac
gcgtgtcacggcgaatcgtgccccctcgcgaaaggcttctacgaccggctgccggccgcg
cgcgatgcggcgatcgaggccggactgctcgatcgcgatacggtgcgcaccgcggcgctc
gcgcacgacgtctgtccgtactacctggcgcaggaactcgcgcgctggtcggacatggtg
atcggcgactacaactactactacgacggcagcgcgatgctgcacacgctcgcgcagcag
aaccagtggcgcgtcggcgtgctcgtcgacgaagcgcacaacctgctcgatcgcgcccgc
aagatgtacagcgcgtcgctcgatccgttcgcgttcgcggccgcgcgggaagccgcgccc
gccgcgttgcgcaaggcgttcgaccggctcgcccgcgcgtggggcacgctcaatcgtgcg
caggccgagcgctatgcggcctatcccgacgtgccgggcacgatcgtgtcggccgtgcag
aacctcgtcgcggcgatcggcgaacacctgaccgacgcgccgcgcgcgaacggcgacgcg
ctgctgcgctttcacttcgaagcaatccagttcggcgtgctggccgaagcgttcgacagc
gcgtcgatcttcgacgcgacgctgcacggcgaaccgatgccgcgccagcccgtgctcgac
ggcgtcgcggcggccggccgccggcgccgcgtccagtcgacgctgtgcgtgcgcaacgtg
atcccggccggtttcctggcgccgcgctacgccgccgcgcgcgcgaccgtgctgttctcc
ggcacgctgagcccgttccatttctaccgcgacacgctggggctgcccggcgatacgggc
tggctcgacgtcgatgggccgttccgcgccgagcaactgacggtgcgcgtggcgagccac
gtgtcgacccgctggcgcgaccgcgatcgctcgctcgaaccgatcgccgacctgatcgcc
gcgcaatatgcgacgcgccccggcaactatctcggcttcctgagcagcttcgattacctc
gggcgcgtggtcgcgctgatgcagacgcgccatccggacgtccccgtgtgggcgcaggcg
cccggcatggccgaaagcgagcgcgatgcgtttctcgcgcgcttcgacgcgggcggacgc
ggcgtcggtttcgcggtgctgggcggggcgttctcggaaggcgtcgacctggtcggcgag
cggctgatcggcgcgttcatcgcgacgctcgggctgccgcaggtcaacgacgtcaacgag
cagatgcggcgcgcgatggacgcgcgcttcggcaacggctacgactacatgtacctgtat
ccggggctgcagaaggtcgtgcaggcggccgggcgcgtgatccgcaccgagcacgacgag
ggcgtcgtgcatctgatcgacgaccgttaccggcgacgcgaagtgcgcaatctgctgccg
cggtggtggcggatcgggtga
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integrated database retrieval system
