Burkholderia cenocepacia H111: I35_6285
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Entry
I35_6285 CDS
T03804
Symbol
soxA
Name
(GenBank) Sarcosine oxidase alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
bceo
Burkholderia cenocepacia H111
Pathway
bceo00260
Glycine, serine and threonine metabolism
bceo01100
Metabolic pathways
Module
bceo_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bceo00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
I35_6285 (soxA)
Enzymes [BR:
bceo01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
I35_6285 (soxA)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
I35_6285 (soxA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
Pyr_redox_3
NAD_binding_8
FAD_binding_2
HI0933_like
FAD_binding_3
DAO
NAD_binding_7
GIDA
Pyr_redox
Thi4
AlaDh_PNT_C
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
CDN64121
LinkDB
All DBs
Position
2:complement(2599103..2602114)
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AA seq
1003 aa
AA seq
DB search
MSQKDRLGTGGRINRAIPLTFTFNGRTYQGFQGDTLASALLANGVHFVARSFKYHRPRGI
VTADVAEPNAVVQLETGPYTVPNARATEIELYQGLVATSVNAEPTLENDKYAINQKFSRF
MPAGFYYKTFMWPRNMWPKYEEKIREAAGLGKAPEVLDADRYDKCYAHCDVLVVGGGPSG
LAAAHAAATAGARVILVDDQRELGGSLLSCRAEIDAKPALQWVEKIEAELRKLPDVTILS
RSTAFGYQDHNLVTVTQRLTDHLPVSMRKGTRELLWKVRAKRVILATGAHERPIVFGNND
LPGVMLAGAVSTYVHRFGVLPGRNVVVFTNNDRAYQTALDLKACGAKVTVVDSRASSNGA
LPAAAKRQGVTVMSGAVVTAASGKWRVSSVDVASYSNGQTGGKLQTLPCDLVAMSGGFSP
VLHLFAQSGGKACWNDEKACFLPGKPVQAEASIGAAAGEFGLARALRLAVDAGVEAAKAA
GFTAAQRPAAPQVAETVEGALQPLWLVGSREAAARGPKQFVDFQNDVAAADILLAAREGF
ESVEHVKRYTAMGFGTDQGKLGNINGMAILAGALGKTIPETGTTTFRPNYTPVSFGTFAG
RETGDFLDPIRKTAVHEWHVEHGAMFEDVGNWKRPWYFPKNGEDLHAAVKRECLAVRNGV
GILDASTLGKIDIQGPDAVKLLNWMYTNPWNKLEIGKCRYGLMLDENGMVFDDGVTVRLA
DQHFMMTTTTGGAARVLTWLERWLQTEWPDMKVRLASVTDHWATFAVVGPKSRKVVQKVC
QDIDFGNEAFPFMSYRNGTVAGAKARVMRISFSGELAYEVNVPANAGRAVWEALMAAGAE
FDITPYGTETMHVLRAEKGYIIVGQDTDGSITPYDLGMGGLVAKSKDFLGKRSLSRSDTA
KEGRKQFVGLLTEDEQFVLPEGAQIVAKDTQVSAVDPTPMIGHVTSSYYSPILKRSIALA
VVKGGLNKMGESVVIPLANGRRITAKISSPVFYDTEGVRQHVE
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaagaccgcctcggcaccggtggccgcatcaatcgcgcgattccgttgacg
ttcacgttcaacggccgcacgtaccagggcttccagggcgacacgctcgcgtccgcgctg
ctcgcgaacggcgtgcatttcgtcgcgcgcagtttcaagtaccaccgtccgcgcgggatc
gtgacggcggacgtcgcggaaccgaatgccgtcgtgcagctcgaaaccggcccgtacacg
gtgccgaacgcgcgcgcgaccgagatcgagctgtaccaggggctcgtcgcgaccagcgtg
aacgcggagccgacgctcgagaacgacaagtatgcgatcaaccagaagttctcgcgcttc
atgccggccgggttctactacaagaccttcatgtggccgcgcaacatgtggccgaagtac
gaagagaagatccgcgaagcggccggcctcggcaaggcgcccgaagtgctcgacgccgat
cgctacgacaaatgctacgcgcactgcgacgtgctcgtggtcggcggtggcccgtcgggc
ctcgccgccgcgcatgcggccgccacggccggcgcgcgcgtgattctcgtcgacgaccag
cgcgaactcggcggcagcctgctgtcgtgccgcgcggagatcgacgcgaagcccgcgctg
caatgggtcgagaagatcgaggccgaactgcgcaagctgcccgacgtgacgatcctgtcg
cgcagcaccgcgttcggctatcaggaccataacctcgtgacggtcacgcagcgcctcacc
gatcacctgccggtgtcgatgcgcaagggcacgcgcgaattgctgtggaaggtccgcgcg
aaacgcgtgatcctcgcgaccggcgcgcacgagcggccgatcgtgttcggcaacaacgac
ctgccgggcgtgatgctggcgggcgcggtgtcgacctacgtgcatcgcttcggcgtgttg
ccgggccgcaacgtggtcgtgttcacgaacaacgaccgcgcctatcagaccgcgctcgac
ctgaaggcgtgcggcgcgaaggtgacggtcgtcgattcccgcgcgtcgtcgaacggcgcg
ctgccggccgctgcgaagcggcagggcgtgacggtgatgagcggcgcggtcgtcacggcc
gcttcgggcaagtggcgcgtatcgtcggtcgacgtcgcgtcctactcgaacggccagacc
ggcggcaagctgcagacgctgccgtgcgacctcgtcgcgatgtcgggcggtttcagcccg
gtgctgcacctgttcgcgcaatcgggcggcaaggcgtgctggaacgacgagaaggcgtgc
ttcctgccgggcaagcccgtgcaggcggaagcgagcatcggcgcggcggccggcgaattc
gggctcgcccgtgcgctgcggctcgcggtggatgcgggcgtcgaagcggcgaaggccgcg
ggcttcacggccgcgcagcgtccggccgcaccgcaggtcgcggaaaccgtcgaaggcgcg
ctgcagccattgtggctcgtcggcagccgcgaggcggccgcgcgcgggccgaagcagttc
gtcgacttccagaacgacgttgccgccgccgacatcctgctcgccgcgcgcgaaggcttc
gaatcggtcgaacacgtgaagcgctacacggcgatgggcttcggcaccgaccagggcaag
ctcggcaacatcaacgggatggcgatcctcgcgggcgcgctcggcaagacgattccggaa
acgggcacgacgacgttccgcccgaactacacgcccgtgtcgttcggcacgttcgcgggc
cgcgagacgggcgacttcctcgacccgatccgcaagacggccgtgcacgaatggcacgtc
gagcacggcgcgatgttcgaggacgtcggcaactggaagcggccgtggtatttcccgaag
aacggcgaggatctccatgcggccgtgaagcgcgaatgcctcgcggtgcgcaacggcgtc
ggcattctcgatgcgtcgacgctcggcaagatcgacatccagggcccggacgcggtgaag
ctgctgaactggatgtacacgaacccgtggaacaagctcgagatcggcaagtgccgctac
gggctgatgctcgacgaaaacgggatggtgttcgacgacggcgtgaccgtgcgcctcgcc
gaccagcatttcatgatgacgaccaccaccggcggcgcggcgcgcgtgctgacgtggctc
gagcgctggctgcagaccgaatggcccgacatgaaggtgcggctcgcgtccgtcaccgat
cactgggcgacgttcgcggtggtcggcccgaagagccgcaaggtcgtgcagaaggtgtgc
caggacatcgacttcggcaatgaggcgttcccgttcatgagctaccgcaacggcacggtt
gccggcgcgaaggcgcgcgtgatgcggatcagcttctcgggcgaactcgcctacgaagtg
aacgtgccggcgaatgcgggccgcgcggtgtgggaagcgctgatggcggccggcgccgag
ttcgacatcacgccgtacggcacggaaacgatgcacgtgctgcgcgcggagaagggctac
atcatcgtcggccaggacaccgacggctcgatcacgccgtacgacctcgggatgggcggg
ctcgtcgcgaagtcgaaggacttcctcggcaagcgttcgctgtcgcgttcggataccgcg
aaggaaggccgcaagcagttcgtcggcctgctgaccgaagacgaacagttcgtgctgccg
gaaggcgcgcagatcgtcgcgaaggacacgcaggtgtcggcggtcgatccgacgccgatg
atcggccacgtgacgtccagctactacagcccgatcctgaagcgctcgatcgcgctcgcg
gtggtgaagggcggcctgaacaagatgggcgagagcgtcgtgattccgctggccaacggc
cgccgcatcaccgcaaagatttcgagcccggttttctacgataccgaaggggtgcgtcag
catgtggaatga
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