KEGG   Burkholderia cepacia ATCC 25416: APZ15_01840
Entry
APZ15_01840       CDS       T04772                                 
Name
(GenBank) nucleotide-binding protein
  KO
K06958  RNase adapter protein RapZ
Organism
bcep  Burkholderia cepacia ATCC 25416
Brite
KEGG Orthology (KO) [BR:bcep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bcep03019]
    APZ15_01840
Messenger RNA biogenesis [BR:bcep03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     APZ15_01840
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_16 AAA_22 AAA_28 AAA_18 CoaE AAA_29 FtsK_SpoIIIE AAA_23 SLFN-g3_helicase
Other DBs
NCBI-ProteinID: ALK16649
LinkDB
Position
1:396082..396990
AA seq 302 aa
MRIVLITGISGSGKSVALNALEDAGYYCVDNLPPHVLPELARYLAEDGQHRLAVAIDARS
SASLDEMPGLIRELSREHDVRVLFLNASTQSLIQRFSETRRRHPLSGSLSHDADVGLLSS
LEEAIERERHLVAPLAEFGHQIDTSTLRANALRTWVKRFIEQKNNDLMVMFESFGFKRGV
PLDADLMFDVRALPNPYYDHELRPLTGLDQPVIAFLDALPIVHQMIDDIHAFLMKWLPHF
RDDNRSYLTVAIGCTGGQHRSVFIAETLAARLAREANVIVRHRDAPVDVDASSRLVSEVD
RP
NT seq 909 nt   +upstreamnt  +downstreamnt
atgcgcatcgtcctcatcaccggcatctccggctcaggcaagtccgtcgcgctgaacgcg
ctcgaagacgcaggctattactgcgtcgacaacctgccgccgcacgtgctccccgaactt
gcccgctacctcgcggaggatggccagcaccggctcgcggtcgcgatcgacgcgcgctcg
agcgcatcgctcgacgaaatgcccggcctgattcgcgagctgtcgcgcgagcacgacgtc
cgcgtgctgttcctcaacgcgagcacccagtcgctgatccagcgcttctccgaaacgcgc
cgccgtcatccgctgtccggctcgctgtcgcatgatgcggacgtcggcctgctgtcatcg
ctcgaggaagcgatcgaacgcgaacgccacctcgtcgcgccgctcgccgaattcggccac
cagatcgacacgagcacgctgcgcgcgaacgcgctgcgtacgtgggtcaagcgcttcatc
gagcagaagaacaacgacctgatggtgatgttcgaatcgttcggtttcaagcgcggcgtg
ccgctcgacgccgacctgatgttcgacgtgcgcgcgctgccgaacccgtactacgaccac
gagttgcgcccgctcaccgggctcgaccaaccggtcatcgcctttctcgacgcactgccg
atcgtccaccagatgatcgacgacatccatgcgttcctgatgaaatggctgccgcacttc
cgcgatgacaaccgcagctacctgaccgtcgccatcggctgcacgggcgggcagcatcgt
tcggtgttcatcgcggaaacgcttgccgcgcgccttgcgcgcgaggcgaacgtgatcgtg
cggcatcgtgacgcgccagtggatgtcgacgcgtcgtcgcggctcgtctccgaggtcgac
cgaccctag

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