Burkholderia cepacia ATCC 25416: APZ15_02345
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Entry
APZ15_02345 CDS
T04772
Name
(GenBank) cytochrome C
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
bcep
Burkholderia cepacia ATCC 25416
Pathway
bcep00550
Peptidoglycan biosynthesis
bcep01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
APZ15_02345
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bcep01002
]
APZ15_02345
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bcep01011
]
APZ15_02345
Enzymes [BR:
bcep01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
APZ15_02345
Peptidases and inhibitors [BR:
bcep01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
APZ15_02345
Peptidoglycan biosynthesis and degradation proteins [BR:
bcep01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
APZ15_02345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
ALK16740
LinkDB
All DBs
Position
1:complement(513879..515189)
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AA seq
436 aa
AA seq
DB search
MRLSSQGLKSLASSIAFGTAARNVALGVMLPVALASTIVVAEAKPAAKAKAAHAAPAAEQ
FTGAPATYMPGAVPPPGVNARSWVLVDATSNTVLASGNADERVEPASLTKLMTAYLVFEA
LDKKKISMEQIVTPSEAVRRVGRDESRMFIEANKPVSVHDLVYGMIIQSGNDAAIALAEL
VGGSEGQFVTMMNDEAARLGMKGTHFADVNGMPDPNHYTTAGDLAKLSAHLIRDFPQYYS
IFSEKEFKYNNIRQGNRNRLLWLDPTVDGLKTGHTQAAGYCLIASAKRAIPGVDGQRRLV
SVMMGEQKESERTQDSMKMLNYGYSAFDSVRLFKGGQAMSTPRVYKGKENTVQVGVKGDQ
WATVPRGLGDKVKTEVDVNAPLIAPLAAGQQVGTVKIVADGKTLSEFPVVALQAVPEAGI
FGRIWDSILLMFSKKK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtcttcccaaggcctcaagtccctcgcttcctccatcgccttcggcaccgcc
gcgcgcaacgtcgcgctcggcgtgatgctgcctgtcgcgctcgcgtcgacgatcgtcgtt
gccgaggccaagccggccgccaaggccaaggccgcgcatgcggcgccggccgccgagcag
ttcaccggcgcgcccgcgacctacatgccgggcgcagtgccgccgccgggcgtgaatgcg
cgctcgtgggtgctcgtcgatgcgaccagcaacacggtgctcgcatcgggcaatgccgat
gaacgcgtcgagcccgcatcgctgacgaagctgatgacggcgtacctcgtgttcgaggcg
ctcgacaagaagaagatctcgatggagcagatcgtcacgccgagcgaagccgtgcgccgc
gtcggccgcgacgagtcgcgcatgttcatcgaggcgaacaagccggtgtcggtgcacgat
ctcgtgtacgggatgatcatccagtcgggcaacgacgccgcgatcgcgctggccgaactg
gtcggcggcagcgaagggcagttcgtcacgatgatgaacgacgaggcggcgcgcctcggc
atgaagggcacgcacttcgccgacgtgaacggcatgcccgacccgaaccactacacgacg
gccggcgacctcgcgaagctgtccgcccacctgatccgcgattttccgcagtactacagc
atcttctcggagaaggaattcaagtacaacaacatccgccagggcaaccgcaaccgcctg
ctgtggctggatccgacggtcgacggcctgaagacgggccatacgcaggcggccggctac
tgcctgatcgcgtcggcgaagcgcgcgatcccgggtgtggacggccagcgccgcctggtg
tcggtgatgatgggcgagcagaaggaaagcgagcgcacgcaggacagcatgaagatgctg
aactacggctacagcgcgttcgattcggtgcgcctgttcaagggcggccaggcgatgtcg
acgccgcgcgtctacaagggcaaggaaaacaccgtgcaggtgggcgtgaagggcgaccag
tgggcgaccgtgccgcgcggcctcggcgacaaggtcaagacggaagtcgacgtcaacgcg
ccgctgatcgcgccgctcgcggcaggccagcaggtcggcaccgtgaagatcgtcgccgac
ggcaagacgctgtccgaattcccggtcgtcgcactgcaggccgtgccggaagcgggtatc
ttcgggcgtatctgggactcgatcctgctgatgttcagcaagaagaagtaa
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