Burkholderia cepacia ATCC 25416: APZ15_03850
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Entry
APZ15_03850 CDS
T04772
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bcep
Burkholderia cepacia ATCC 25416
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcep03032
]
APZ15_03850 (gyrB)
03400 DNA repair and recombination proteins [BR:
bcep03400
]
APZ15_03850 (gyrB)
Enzymes [BR:
bcep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
APZ15_03850 (gyrB)
DNA replication proteins [BR:
bcep03032
]
Prokaryotic type
DNA Topoisomerases
APZ15_03850 (gyrB)
DNA repair and recombination proteins [BR:
bcep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
APZ15_03850 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ALK17016
LinkDB
All DBs
Position
1:846292..848766
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AA seq
824 aa
AA seq
DB search
MSEQHNSQPDNSSYGASSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSIDEA
LAGYCNDIHVTIHADNSISVTDNGRGIPTDVKMNDKHEPKRSAAEIVMTELHAGGKFDQN
SYKVSGGLHGVGVSCVNALSSWLRLTVRRDGKKRFMEFHRGVAQDRVLEVVDGVEVSPML
VTGDTENRGTEVHFMADPTIFGTVEYHYDILAKRMRELSFLNNGVRIRLTDLRSGKEDDF
AFAGGVKGFVEYINKTKTNLHPTVFFANGEKDGVGVEVAMQWNDSYNENVLCFTNNIPQR
DGGTHLTGLRAAMTRVINKYITDNEIAKKAKVETTGDDMREGLSCVLSVKVPEPKFSSQT
KDKLVSSEVRAPVEEVVAKALEEFLLETPIDAKIICGKIVEAARARDAARKAREMTRRKG
VLDGVGLPGKLADCQEKDPAKCEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKA
RYDKLLSSEQIVTLVTALGCGIGKEDYNLDKLRYHRIIIMTDADVDGAHIRTLLLTFLYR
QMPDMIERGYVYIAQPPLYKIKAGKDERYLKDDVELNAHMLRLALQGSELVPGENAAAIS
GDALGELARSYLLSQSVIERLSRLYDPAALEAVMDGVVIDLSTEASTEASAKALHAALHD
EALKNEVRVVPSYDAVREQRALHVERTHHGNVRVSVIDQEFQHTADYQQLVTTANTFKGL
IGEGAVIKRGERSMAVADFKSAMKWLLADAERNVSKQRYKGLGEMNPEQLWETTMDPAVR
RLLRVQIEDAIAADGIFTTLMGDDVEPRRAFIESNALRAGNIDV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacagcacaattcgcaacccgataacagcagctacggcgcctcgtcgatccag
atcctcgaaggtctggaagcggtgcgcaagcgccccgggatgtacatcggcgacacgtct
gacggcaccggtctgcaccacctcgtgttcgaggtgctcgacaactcgatcgacgaagcg
ttggccgggtactgcaacgacatccacgtgacgattcacgccgacaactcgatttccgtg
accgacaacggccgcgggatcccgaccgacgtgaagatgaacgacaagcacgagccgaag
cgcagtgcggcggaaatcgtgatgaccgagctgcacgccggcggcaagtttgaccagaac
agctacaaggtgtccggcggcctgcacggcgtgggcgtgtcgtgcgtgaacgcgctgtcg
agctggctgcgcctcaccgtgcgccgcgacggcaagaagcgcttcatggaattccaccgc
ggcgtcgcgcaggatcgcgtgctcgaggtggtggacggcgtggaagtgtcgccgatgctc
gtgaccggtgacaccgagaaccgcggcaccgaagtgcacttcatggccgatccgaccatt
ttcggcacggtcgagtatcactacgacatcctcgcgaagcggatgcgcgagctctcgttc
ctgaacaacggcgtgcggattcgtctgaccgacctgcgctcgggcaaggaagacgatttc
gcgttcgccggcggtgtgaagggcttcgtcgagtacatcaacaagacgaagaccaacctg
cacccgacggtgttcttcgccaacggcgagaaggacggcgtgggcgtcgaagtcgcgatg
cagtggaacgacagctacaacgaaaacgtgctgtgcttcacgaacaacattccgcagcgc
gacggcggcacgcacctgaccggcctgcgggccgcgatgacgcgcgtcatcaacaagtac
atcaccgacaacgaaatcgcgaagaaggcgaaggtcgagacgaccggcgacgacatgcgc
gaagggctgtcgtgcgtgctctccgtgaaggtgccggagccgaagttcagctcgcagacg
aaggacaagctggtttcgtccgaggttcgtgcgccggttgaggaagttgtggcgaaggcg
ttggaagaattcctgctggaaacgccgatcgacgcgaagatcatttgcgggaagattgtt
gaggccgcgcgggcgcgggatgctgcgcggaaggctcgcgagatgacgcgccgtaagggc
gtgctcgatggcgttggcctgcccggcaagctcgcggactgtcaggagaaagacccggcg
aagtgcgaaatctacatcgtcgagggtgactcggcaggtgggtcggcgaagcaagggcgt
gaccggaagttccaggcgatcctgccgctgcgcggcaaggtgctgaacgtcgagaaggca
cgctacgacaagctgctgtcgtcggaacagatcgtcacgctcgtgaccgcgcttgggtgc
gggatcggcaaggaagactacaacctcgacaagctgcgctatcaccgcatcatcatcatg
accgacgcggacgtcgacggtgcgcacatccggacgctgctgctcacgttcctgtatcgc
cagatgccggacatgatcgagcgcggctatgtgtatatcgcgcagccgccgctttacaag
atcaaggcgggcaaggacgagcggtatctgaaggatgacgtggagctcaacgcgcatatg
ctgcggttggcgctgcaagggtcggagctggtgccgggtgagaacgcggcggcgatttcg
ggcgatgcgcttggggagttggcacggtcgtatctgctgtcgcagagcgtgatcgagcgg
ttgagccggttgtatgacccggctgcgctggaagccgtcatggatggggtggtgatcgat
ctctcaactgaggcttcgactgaggcttcggcgaaggcgctgcacgctgcgttgcatgac
gaagcgctgaagaacgaagtgcgggttgtgccttcgtatgacgcggttcgcgaacagcgg
gcgctgcatgtcgaacgcacgcatcacggcaacgtgcgagtttcggtcatcgaccaggaa
ttccagcacacggcggattatcagcagctcgtgacgacggcgaatacgttcaaggggcta
attggggaaggtgcggttatcaagcgcggggagcgcagcatggccgtggctgacttcaag
agcgcgatgaagtggctgttggcggatgccgagcggaacgtttcgaagcagcggtataag
gggctgggggagatgaaccccgagcagctgtgggaaacgacgatggatccggcggtgcgg
cgtctgctgcgtgtgcagatcgaagacgcaattgcggcggatgggatctttactaccctc
atgggggatgatgtcgagccgcggcgggcgtttatcgagtcgaatgcgttgcgggcgggg
aatattgatgtttga
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