KEGG   Burkholderia cepacia ATCC 25416: APZ15_04270
Entry
APZ15_04270       CDS       T04772                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
bcep  Burkholderia cepacia ATCC 25416
Brite
KEGG Orthology (KO) [BR:bcep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcep03032]
    APZ15_04270
   03036 Chromosome and associated proteins [BR:bcep03036]
    APZ15_04270
   03400 DNA repair and recombination proteins [BR:bcep03400]
    APZ15_04270
DNA replication proteins [BR:bcep03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    APZ15_04270
Chromosome and associated proteins [BR:bcep03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    APZ15_04270
DNA repair and recombination proteins [BR:bcep03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      APZ15_04270
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF937 DUF2267 HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: ALK17085
LinkDB
Position
1:complement(941279..941557)
AA seq 92 aa
MNKQELIDAVAAQTGASKAQTGETLDTLLEVIKKAVSKGDAVQLIGFGSFGSGKRAARTG
RNPKTGETIKIPAAKTVKFTAGKAFKDAVNKR
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaacaaacaggaactgatcgacgccgtcgccgcccaaacgggcgccagcaaggctcaa
accggcgaaacgctggacacgctgctcgaagtcatcaagaaggccgtgtcgaagggtgat
gcggttcagctgatcggcttcggcagcttcggttcgggcaagcgcgcagcacgtacgggc
cgcaacccgaagacgggcgaaaccatcaagatcccggcagccaagacggtcaagttcacg
gctggcaaggcgttcaaggacgccgtcaacaagcgttaa

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