Burkholderia cepacia ATCC 25416: APZ15_06500
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Entry
APZ15_06500 CDS
T04772
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
bcep
Burkholderia cepacia ATCC 25416
Pathway
bcep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APZ15_06500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcep03019
]
APZ15_06500
Messenger RNA biogenesis [BR:
bcep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
APZ15_06500
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
ALK17477
LinkDB
All DBs
Position
1:complement(1417211..1417858)
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AA seq
215 aa
AA seq
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MLDREGFRPNVGIILLNARNEVFWGKRLREHSWQFPQGGIKYGETPMQAMYRELHEETGL
HPEHVKIIGRTRDWLRYEVPDKFIKREVRGHYRGQKQIWFLLRMVGRDCDICLRATDHPE
FDAWRWNEYWVPLDAVIEFKRDVYQLALTELSRFLRRPAQRAEKPRGPRLSRYPRVIGAQ
AQQTLTIVDASVVCSEIEVEASTLDEMPPRVIVGK
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgctggatcgtgaaggctttcgcccgaacgtcggcatcatcctcttgaacgcgcgcaac
gaggtgttttggggcaagcggctccgcgagcattcctggcagtttcctcaaggtgggatc
aagtacggcgagacccccatgcaggcgatgtaccgggaactgcacgaggaaacgggcctg
catccggaacacgtcaagataatcggccgcactcgcgactggttgcgttatgaggtgcct
gacaagttcatcaaacgcgaagtacgcggtcattaccgcggccagaagcagatctggttc
ctgctgcggatggtcggacgcgattgcgacatttgcttgcgcgcgaccgaccacccggag
ttcgatgcgtggcgctggaacgagtactgggtgccgctcgatgcggtgatcgagttcaag
cgggatgtctatcagttggcgctgacggaactgtcgcgcttcctgcgccgcccggcgcag
cgagccgagaagccgcgtgggccgcgtctgtcgcgctatccgcgcgtcatcggcgcacag
gcccagcagacgctgacgattgtcgacgcatcggtagtctgttcggagatcgaagtggaa
gcgagcacgctcgacgagatgccgccccgcgtgatcgtcggcaaatga
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