Burkholderia cepacia ATCC 25416: APZ15_06615
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Entry
APZ15_06615 CDS
T04772
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bcep
Burkholderia cepacia ATCC 25416
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcep03016
]
APZ15_06615
Enzymes [BR:
bcep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
APZ15_06615
Transfer RNA biogenesis [BR:
bcep03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
APZ15_06615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ALK17499
LinkDB
All DBs
Position
1:1441336..1443432
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AA seq
698 aa
AA seq
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MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFDKPAAGELMQEADTA
AQQIDLDFLWECAPTDEFAYTALAAEYFGATYGPVERAALVLRLHGSPVYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQAQYEEELKAGKLPEAFAGKVLGLLTRPDKNAIEYKA
MEAAAGARGVSPARLMLDCGGIASPRALHEARFLAEFFPHGTGFPAVTVGPLPDDLPRAD
VEAFSIDDITTTEIDDAFSVEHLSDGRVRIGVHIAAPALGIVRGDAIDAIARTRLSTVYM
PGDKITMLPDDVVDVFTLKEGDYRPALSLYIIVNRETQEIVANETRAELVFVKNNLRHNN
LDELVNEETLAAGTGDYPHKDDIAVLWPLAQALFEKRQVARAGYGLKREVQRNTDYNFYV
EGEHVTITPRRRGSPLDLIVSELAILANSTWGAFLHDHTVPGIYRSQRGFGAPGPKRTRM
QTTAAPHEGLGVAQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKPKDADLYAV
VQGFDDTYTAYADYQRRMEYFWCLRWLAQEQKKQVVASVVKGDLVRLEEIPLLLHVPGLG
VHARGTRVLLDVMSLDELTIEASVRLLNVLDAPTVTSGDAADEEDDAEGGDDTLIDAEDA
TAETEAEALAEADGAAAGEGGEGGEATGGNAEEEGRAS
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgacgcatttcaggtcgagttgcccggcgggcggcgggccaaggtgcgcgcgaaagac
gtgctgatcgaattcgacaagccggccgcgggcgaactgatgcaggaagccgacacggcc
gcgcagcagatcgacctggatttcctgtgggaatgcgcgccgaccgacgagttcgcgtat
acggcgctggccgcggaatacttcggcgcgacgtacggcccggtggagcgtgcggcgctg
gtgttgcgactgcacggctcgcccgtctacttccgccgcaaggggcgcggccagtaccag
cgcgcgccggaagagcagctcaagatggcgctcgcgtcgctcgagcgcaagcgccagcag
gcgctcgtccaggcgcagtacgaagaggaactgaaggccggcaagctgccggaagcgttc
gcgggcaaggtgctcgggctgctgacgcggccggacaagaacgcgatcgaatacaaggcg
atggaagcggcggccggtgcgcgcggcgtgtcgccggcgcggctgatgctcgactgcggc
ggcatcgcgtcgccgcgcgcgctgcacgaggcgcgcttcctcgcggagttcttcccgcac
ggcacgggcttcccggccgtcacggtcggcccgctgccggacgacctgccgcgcgcggac
gtcgaggcgttctcgatcgacgacatcacgacgaccgaaatcgacgacgcattctcggtc
gagcatctctccgacggccgcgtgcgcatcggtgtgcacatcgcggcgccggcgctcggc
atcgtgcgaggcgacgcgatcgacgcgatcgcgcgcacgcgcctgtcgaccgtctacatg
ccgggcgacaagatcacgatgctgccggacgacgtcgtcgacgtgttcacgctgaaagag
ggcgactaccgcccggcactgtcgctgtacatcatcgtcaaccgcgaaacgcaggagatc
gtcgcgaacgagacgcgcgccgagctcgtgttcgtgaagaacaacctgcggcacaacaac
ctcgacgagctcgtcaacgaagagacgctcgcggccggcaccggcgactacccgcacaag
gacgacatcgccgtgctgtggccgctcgcgcaggcgctgttcgagaagcgccaggtcgcg
cgcgcgggttacggcctgaagcgcgaggtgcagcgcaacaccgactacaacttctacgtc
gaaggcgagcacgtgacgatcacgccgcgccgccgcggctcgccgctcgacctgatcgtg
tcggagctcgcgatcctcgcgaactcgacctggggcgcgttcctgcacgatcacacggtg
ccgggcatctatcgctcgcagcgcggcttcggcgcaccgggcccgaagcgcacgcggatg
cagacgacggccgcgccgcacgaaggtctcggcgtcgcgcagtacgcctggagcacgtcg
ccgctgcgccgctacgtcgacctcgtgaaccagtggcagctgctcgcgtgcgtgcagcac
ggcgtcaccgcgaagctcgccgcaccgttcaagccgaaggacgccgacctgtacgcggtc
gtgcagggcttcgacgacacgtatacggcctacgccgactaccagcgccggatggagtac
ttctggtgcctgcgctggctcgcgcaggagcagaagaagcaggtcgtcgcgagcgtggtg
aagggcgatctcgtacgcctcgaggaaattccgctgctgctgcacgtgccggggctcggc
gtgcatgcgcgcggcacgcgcgtgctgctcgacgtgatgtcgctcgacgagctgacgatc
gaggcatcggtgcggttgctgaacgtgctcgatgcgccgaccgtgacgagcggcgacgcg
gccgacgaagaggatgacgccgaaggcggcgacgacacgctgatcgacgccgaagacgcg
acggccgaaaccgaggcggaagcgctggcggaggcggacggcgcagcagccggcgaaggt
ggtgaaggcggcgaagccacgggcggcaacgccgaagaagaggggcgcgcatcatga
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