Burkholderia cepacia ATCC 25416: APZ15_07650
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Entry
APZ15_07650 CDS
T04772
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bcep
Burkholderia cepacia ATCC 25416
Pathway
bcep00260
Glycine, serine and threonine metabolism
bcep00460
Cyanoamino acid metabolism
bcep00630
Glyoxylate and dicarboxylate metabolism
bcep00670
One carbon pool by folate
bcep00680
Methane metabolism
bcep01100
Metabolic pathways
bcep01110
Biosynthesis of secondary metabolites
bcep01120
Microbial metabolism in diverse environments
bcep01200
Carbon metabolism
bcep01230
Biosynthesis of amino acids
bcep01240
Biosynthesis of cofactors
bcep04981
Folate transport and metabolism
Module
bcep_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
APZ15_07650 (glyA)
09102 Energy metabolism
00680 Methane metabolism
APZ15_07650 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
APZ15_07650 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
APZ15_07650 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
APZ15_07650 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
APZ15_07650 (glyA)
Enzymes [BR:
bcep01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
APZ15_07650 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ALK17679
LinkDB
All DBs
Position
1:1688345..1689592
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AA seq
415 aa
AA seq
DB search
MFDRAQSTIANVDPEIFAAIEQENRRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNENEDIDYEAAEKLAQEHKPKLIVAGASAFSL
KIDFERLAKIAKSVGAYLMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEYEKPINSAIFPGIQGGPLMHVIAGKAVAFKEALSPEFKAYQEKVVENARVLAETL
VKRGLRIVSGRTESHVMLVDLRAKNITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGV
RLGSPAMTTRGFGPAEAEQVGNLIADVLENPEDAATIERVRAQVAELTKRFPVYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagagcccaaagcaccatcgcgaacgtcgatcccgaaatctttgctgcgatc
gagcaggaaaaccgccgccaggaagatcacatcgagctgatcgcgtcggaaaactacacg
agcccggcggtgatggccgcgcagggttcgcagctcacgaacaagtacgcggaaggctat
ccgggcaagcgttactacggcggctgcgaatacgtggacgtggtcgagcagctggcgatc
gatcgcgtgaagcagctgttcggcgcggaagcggcgaacgtgcagcctaactcgggttcg
caggcgaaccagggcgtgttcttcgcgatgctcaagccgggcgacacgatcatgggcatg
agcctcgcgcacggcggccacctgacgcacggctcgccggtgaacatgtcgggcaagtgg
ttcaacgtggtgagctacggcctgaacgagaacgaagatatcgattacgaagcggcagag
aagcttgcgcaggaacacaagccgaagctgatcgtcgcgggcgcgtcggcattctcgctg
aagatcgatttcgagcgtctggcgaagatcgcgaagtcggtcggtgcgtacctgatggtc
gacatggcgcactacgccggcctgatcgcggcgggcgtgtacccgaacccggtgccgcac
gcggacttcgtgacgacgacgacgcacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaggcggagtacgagaagccgatcaattcggcgatcttcccggggatccagggc
ggcccgctgatgcacgtgatcgcgggcaaggcggtggcgttcaaggaagccctgtcgccg
gaattcaaggcgtaccaggagaaggtggtcgagaacgcacgcgtgctggctgaaacgctg
gtgaagcgcggccttcgcatcgtgtcgggccgcaccgaaagccacgtgatgctggtcgac
ctgcgcgcgaagaacatcacgggcaaggcagcggaagccgcgctcggcgccgcgcacatc
acggtcaacaagaacgcgatcccgaacgatccggaaaagccgttcgtgacgagcggcgtg
cgcctgggctcgccggcgatgacgacgcgcgggttcggtccggcggaagcggaacaggtg
ggcaacctgatcgctgacgtgctggaaaacccggaagatgcagcgacgatcgagcgcgtg
cgcgcgcaggtcgccgagctgaccaagcgtttcccggtctatcgctga
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