Burkholderia cepacia ATCC 25416: APZ15_09095
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Entry
APZ15_09095 CDS
T04772
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bcep
Burkholderia cepacia ATCC 25416
Pathway
bcep03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
APZ15_09095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcep03019
]
APZ15_09095
03009 Ribosome biogenesis [BR:
bcep03009
]
APZ15_09095
Messenger RNA biogenesis [BR:
bcep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
APZ15_09095
Ribosome biogenesis [BR:
bcep03009
]
Eukaryotic type
Pre-60S particles
RNases
APZ15_09095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ALK17939
LinkDB
All DBs
Position
1:1991060..1991680
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AA seq
206 aa
AA seq
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MTDTAASTSQPALVRNELNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDVAVEGPVFAI
HQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEADAAAQLQAFLAQYVSPGKSPMCGNS
ICQDRRFMARWMPEFERFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESI
DELKYYREHLLIPAASAPAGESAPAA
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgccgcttccaccagccagcccgcgctcgtgcgcaacgagttgaacctc
gtctggctcgacatggagatgacgggcctcgacccggataacgaccgcatcatcgagatc
gcggtcgtcgtgaccaattccacgctcgacgtcgccgtcgaaggccccgtgttcgcgatc
caccagagcgacgaaacgctcgcgaagatggacgactggaacaagtcgacgcacggccgc
tcgggcctgatcgaccgcgtgcgcgcgtcgaccgtgaccgaggcggacgccgccgcgcag
ctgcaggccttcctcgcgcagtacgtgtcgcccggcaagtcgccgatgtgcggcaactcg
atctgccaggaccgccgcttcatggcgcgctggatgcccgaattcgagcggttcttccac
taccgcaacctcgacgtcagcacgctcaaggagctgtgccgccgctggcaaccggcgatc
tacaaggggttccagaagcgggcgatgcacacggcgctcgcggacatccacgagtcgatc
gacgagctgaagtactaccgcgagcatttactgattccggccgcgtcggctccggcaggc
gagtccgcgccggccgcctga
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