Burkholderia cepacia ATCC 25416: APZ15_09770
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Entry
APZ15_09770 CDS
T04772
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
bcep
Burkholderia cepacia ATCC 25416
Pathway
bcep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
APZ15_09770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcep03400
]
APZ15_09770
Enzymes [BR:
bcep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
APZ15_09770
DNA repair and recombination proteins [BR:
bcep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
APZ15_09770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ALK18062
LinkDB
All DBs
Position
1:2137554..2140898
Genome browser
AA seq
1114 aa
AA seq
DB search
MLHLFYSNRHETLADALLEDLAAFPARNGPWAPQQVIVPSAALRRRLELDIAARNGVCAN
VEFTYLAQWLWAQIGCVLTVPARSPFAPDRLVWRCYRLFAQASDGAPWLASPRLAAYLSA
SDDAMRYELAHRVAAVLDHYLTYRPEWLAAWQAGESVLAGDGAPRGISDAARDDERWQAA
LWRALLAELSDSGTPPAHRFLVEARHLDPETVARARSHWPESVSVFALPTMPPLHVALLR
ELSRWIDVRVYALNPCREFWFDIVTAAHAEALDAAGRLDYQEVGHPLLAEWGRQTQAQLH
MLHELTESAASGDASRFIENPAPTWLARVQNAILELRPEAEAGDAPAERGIEVHVCHSLA
RQLEVLHDRLLAWFDADASLQPSDVLVAVADLAAAGPLIDAVFGTAGSGGARVPYRITGL
PPSQANPVARVLLDWLALPERQVGAPELVEWLRVDAVSARYGIDATALETVQTWLAAAGA
RRGLSLLASDDAAVPSPRHTFSDALARLFLGYAMPEGAAPVGAWLPIEAATGSEAELLGR
LARFTDDLDGFARRLAESHTPHGWSELFADTLARFFDSGAAYADALAGVRDALDAMLAAM
TEGAPDEALPAAVVRAGLAAALDDPARGGVPWGGVTFSSLTSLRGLPYRVVCLLGMDDGV
LPSLARADEFDLMAVLPKLGDRQRRDDERNLFLDLLLAARDRLLIAYTGRSIRDNAPLPP
AALVDELLDHLALVTAGPDAAPDAVDAARRAFIVEHPLQPFAAAYFQPGSALVSYDAERA
TLASLLAAEASRDGPRELPFFAQPLPAEPVEPVAFSEFERFWRHPARALLRGRLGIVLAD
AQAELLDTEPFALDFAGSDALAERVLPLLIESDEGGVHDHALRIADASPELPGGATGAVW
RDQALGSMTQLASNVRRALADGMERRSFSLTVVPAWPDTEQALFGAHDALLSGDAVSAPL
ELHGTLNRLTQAGQIIYRYARPSARDYLSAWLAHLVYCAIEPGGPRRTLWFGSGGAFELT
PVAAPLEQLAPLAALFRAGRRMPLRFFPRSAWARVSDGEAKAASVWINERVVSEADDPAI
AIAWRGAHASLDEPFATLARLVFDPLVEHLKEVA
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgctccatctcttctattcgaaccgtcacgaaacgctggccgacgcgctgctcgaggat
ctggccgcgttcccggcccgcaacggcccgtgggcgccgcaacaggtcattgtgccgagc
gcggcgctgcgccgtcgcctcgagctcgacatcgccgcacgcaacggcgtatgcgcgaac
gtcgagttcacgtatctcgcgcagtggctgtgggcgcagatcggctgcgtgctgacggtg
cccgcgcgttcgccgttcgcacccgaccgcctcgtgtggcgctgctaccggctgttcgcg
caggcatccgacggtgcgccgtggctcgcgtcgccgcggctggccgcgtatctgtccgcg
tccgacgatgcgatgcgctacgagcttgcccaccgcgtcgcggccgtgctcgaccattac
ctgacctatcgtcccgagtggctcgccgcgtggcaggccggcgagtccgtgctcgcgggc
gacggcgcgccgcgcgggatcagcgacgccgcgcgcgacgacgagcgctggcaggccgcg
ctgtggcgcgcgctgctcgccgagctgagcgacagcggcacgccgccggcgcaccgcttc
ctcgtcgaggcgcgccatctcgaccccgaaaccgtcgcgcgcgcacgctcgcactggccg
gaatcggtcagcgtgttcgcgctgccgacgatgccgccgctgcacgtcgcattgctgcgc
gagctgtcgcgctggatcgacgtgcgcgtctatgcgctgaacccgtgccgcgaattctgg
ttcgacatcgtgaccgccgcgcatgccgaggcgctcgacgcggcagggcgcctcgactac
caggaggtcggccatccgctgctcgccgaatggggcaggcagacccaggcgcagctgcac
atgctgcacgaactgactgaaagcgccgcgtcgggcgacgcgtcgcgtttcatcgagaat
cccgcgccgacgtggctcgcgcgtgtgcagaacgcgatcctcgaactgcggcccgaggcc
gaagccggcgatgccccggccgagcgcggcatcgaggtgcacgtgtgccacagcctcgcg
cgccagctcgaggtgctgcacgaccggctgctcgcgtggttcgacgccgacgcgagcctc
cagccgtccgacgtgctcgtcgcggtcgccgatctcgcggcggccgggccgctgatcgat
gccgtgttcggcacggccggcagtggcggtgcacgcgtgccttaccggatcaccggcctg
ccgccttcgcaggcgaacccggtcgcgcgcgtgctgctcgactggctcgcgttgccggag
cggcaggtcggtgcgcccgagctggtcgaatggctgcgcgtcgacgcggtgtcggcacgc
tacggcatcgacgcgacggcgctcgagacggtgcagacctggctcgcggccgccggcgcg
cggcgcgggctgtcgctgctcgcgagcgacgatgcggccgtgccgtcgccgcgtcatacg
ttctccgatgcgctcgcgcggctctttctcggttatgcgatgccggaaggcgcggcgccg
gtcggcgcgtggctgccgatcgaggcggccaccggcagcgaggccgaactgctcggccgg
cttgcacgcttcaccgacgatctcgacggcttcgcgcggcggctggccgaatcgcatacg
ccgcacggctggagcgaactgttcgccgacacgctcgcgcgtttcttcgattcgggcgcc
gcgtatgcggatgcgctcgcgggcgtgcgcgacgcgctcgacgcgatgctggccgcgatg
acggagggggcgcccgacgaagcgctgccggcggccgtcgtccgggccgggctggccgcc
gcgctcgacgatccggcgcgcggcggggtgccgtggggcggcgtcacgttctcgtcgctg
acgagcctgcgcgggctgccgtatcgcgtcgtctgcctgctcgggatggacgatggcgtg
ctgccgagcctcgcgcgcgcggacgaattcgacctgatggccgtgttgccgaagctcggc
gatcgccagcgccgcgacgacgagcgcaacctgtttctcgacctgctgctcgccgcacgc
gaccggttgctgattgcgtacacgggccgcagcattcgcgacaacgcgccgttgccgccc
gcggcactcgtcgacgaattgctcgaccatctcgcgctcgtcacggcaggccccgacgcc
gcgccggacgcggtcgatgccgcgcggcgcgcgttcatcgtcgagcatccgctgcaaccg
ttcgcggccgcgtatttccagcccggcagcgcgctggtgtcctatgacgccgagcgggcg
acgctcgcgtcgctgctcgccgccgaagcgtcgcgcgacggcccgcgcgaattgccgttc
ttcgcgcagccgctgccggccgaaccggtcgagcctgtcgcattcagcgaattcgaacgc
ttctggcgccatccggcgcgcgcgttgctgcgtggccggctcggcatcgtgcttgccgac
gcgcaggccgaactgctcgatacggaaccgttcgcgctcgacttcgccggcagcgatgcg
ctcgccgagcgcgtgctgccgctgctgatcgagtcggacgagggcggcgtgcacgatcat
gcgctgcgcatcgcggacgcgagccccgaactgccgggcggcgcgacaggcgccgtgtgg
cgcgaccaggcgctcggctcgatgacacagctggcgtcgaacgtgcgtcgtgcgctggcc
gacgggatggagcggcggtcgttctcgctcaccgtcgtgcccgcgtggcccgataccgag
caggcgctgttcggcgcgcacgacgcgctgctgtcgggcgacgcggtgagcgcgccgctt
gaactgcacggcacgctgaaccggctgacgcaggccgggcagatcatctaccgttatgcg
aggccgagtgcgcgcgactacctgtccgcgtggcttgcgcatctcgtctactgcgcgatc
gagcccggcggcccgcgccgcacgctgtggttcggcagcggcggcgcgttcgagctgacg
cctgtcgcggcgccgctcgagcagctcgcaccgcttgccgcgctgtttcgcgcggggcgg
cgcatgccgctgcggtttttcccgcgcagcgcatgggcgcgggtgtccgacggcgaggcc
aaggccgcgagtgtctggatcaacgaacgggtcgtgagcgaagccgacgatccggccatc
gcgatcgcatggcgcggcgcgcatgcgtcgctcgacgagccgttcgccacgctcgcgcgg
ctcgtgttcgatccgctcgtcgagcatctgaaggaggttgcatga
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