Burkholderia cepacia ATCC 25416: APZ15_09870
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Entry
APZ15_09870 CDS
T04772
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
bcep
Burkholderia cepacia ATCC 25416
Pathway
bcep02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
APZ15_09870
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bcep02000
]
APZ15_09870
Transporters [BR:
bcep02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
APZ15_09870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
ALK18082
LinkDB
All DBs
Position
1:complement(2162803..2163831)
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AA seq
342 aa
AA seq
DB search
MSFRLTSLLRALAAPVACAALIAGAPAAHADETAICYNCPPEWADWAAQIAAIKQKTGIR
VPFDNKNSGQSIAQLIAEQKSPVADVVYLGVSSAFQAKDKGVIAPYKPAHWNDIPANLKD
PQGYWFAIHSGTLGFFVNKDALDGKPVPRSWADLLKPEYKGMVGYLDPSSAFVGYAGAVA
VNQALGGSLDNFKPALDWFRKLKANAPIVPKQTAYARVLSGEIPILLDYDFDAYRAKYKD
SANVEFVIPKEGTIAVPYVMSLVKGAPHDANGRKVLDFVLSDEGQKLWANAYLRPVRAQA
LGADVASKFLPASEYARAKSVDFGKMAAGQQAFGQQYLQVMQ
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctttcgcctgacctcgctgctgcgcgcgctcgcagctcccgtcgcctgcgccgcg
ctcatcgccggcgcgcccgccgcccacgccgacgaaacggcgatctgctacaactgcccg
cccgaatgggccgactgggctgcacagatcgccgcgatcaagcagaagaccggcatccgc
gtgccgttcgacaacaagaactcgggccagtcgatcgcgcagctgatcgccgagcagaag
agcccggtggccgacgtcgtctacctcggcgtgtcgtcggcgttccaggcgaaggacaag
ggcgtgatcgcgccgtacaagcccgcgcactggaacgacatccccgcgaacctgaaggac
ccgcaaggctactggttcgcgatccactcgggcacgctcggcttcttcgtgaacaaggac
gcgctcgacggcaagccggtgccgcgctcgtgggccgacctgctgaagccggaatacaag
ggcatggtcggctacctcgacccgtcgagcgcgttcgtcggttatgcgggcgcggtcgcc
gtgaaccaggcgctcggcggcagcctcgacaacttcaagccggcgctcgactggttccgc
aagctgaaggcgaacgcgccgatcgtgccgaagcagaccgcgtatgcgcgcgtgctgtcg
ggcgagatcccgatcctgctcgactacgacttcgatgcgtatcgcgcgaagtacaaggac
agcgcgaacgtcgagttcgtgattccgaaggaaggcacgatcgcggtgccgtacgtgatg
agtctcgtgaagggcgcaccgcacgacgcgaacggcaggaaggtgctcgacttcgtgctg
tccgacgaaggccagaagctgtgggccaacgcgtacctgcgcccggtgcgcgcacaggcg
ctcggcgccgacgtcgcgtcgaagttcctgccggcgagcgaatacgcccgcgcgaaatcg
gtcgacttcggcaagatggcggccggccagcaggcattcggccagcagtacctgcaagtg
atgcagtaa
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