Burkholderia cepacia ATCC 25416: APZ15_10145
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Entry
APZ15_10145 CDS
T04772
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
bcep
Burkholderia cepacia ATCC 25416
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bcep01011
]
APZ15_10145
Enzymes [BR:
bcep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
APZ15_10145
Peptidoglycan biosynthesis and degradation proteins [BR:
bcep01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
APZ15_10145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM1_NFP_LYK
DUF6491
Motif
Other DBs
NCBI-ProteinID:
ALK18133
LinkDB
All DBs
Position
1:2218191..2219759
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AA seq
522 aa
AA seq
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MRLILSAMVVLLLAACASQAPVANNAADSQATSNYLRKSATAKETVDVDKQSVGDLTSAD
SDLWGRIRRGFQMPDLQSDLVDMQTTWYTQRPDYVQRMTERSQKYLYHIVEELEARHMPT
ELALLPFIESAYNPQALSVAKAAGMWQFMPGTGRTYNLKRNMWQDERRDVLASTSAALDY
LSRLHDMFGDWYLALAAYNWGEGNVQRAIARNQAAGLPTDYQNLRMPNETRNYVPKLQAV
KNIIASPQQYGLTLPDIPNHPYFVTVTTSRDIDVAVAAKLANLSLDEFRSLNPSFSKPVI
LGATEPQILLPFDNASAFEKNLKAYNGQLSSWTTYTVSERARPAAIAEKIGVDADTLMSI
NKIPAGMRLKPGSTIVVPRGDDDDEDISADVAENGALAMEPDVPDTRKMLIRVRRKQSMA
AIAGRYGVSVGQLKAWNRTHRDLVMPGQALVLHVPVGRSVPAEPGPERIATSAAGAHIER
ASLAVGGKSHGAKRGAAKPAAKSTKATKAAPAKATTHKGKKK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttatattgagtgcgatggtggttctgctgctcgccgcttgtgcgagccaggcc
cctgtcgccaacaacgccgccgattcgcaggcgacgtccaactacctccgtaaatcagcc
accgccaaagaaactgtcgacgtcgacaagcaatccgtcggcgacctgaccagtgcagac
tccgatctctgggggcgcatccgccgcggtttccagatgcccgacctgcagagcgacctc
gtcgacatgcagacgacctggtacacgcagcggcccgactacgtgcagcgcatgaccgag
cgctcgcagaagtacctgtatcacatcgtcgaggagctcgaggcgcgtcacatgccgacc
gagctcgcgctgctgccgttcatcgagtccgcgtacaacccgcaggcgctgtcggtcgcg
aaggcggccggcatgtggcagttcatgcccggcacgggccgtacctacaacctgaagcgc
aacatgtggcaggacgagcgccgcgacgtgctcgcgtcgacgagcgccgcgctcgactac
ctgtcgcgcctgcatgacatgttcggcgactggtatctcgcgctggccgcgtacaactgg
ggcgagggcaacgtgcagcgtgcgatcgcgcgcaaccaggcggccggcctgccgaccgac
tatcagaacctgcggatgccgaacgagacgcgcaactacgtgccgaagctgcaggcggtg
aagaacatcatcgcgagcccgcagcagtacgggctgacgctgccggacatcccgaaccac
ccgtatttcgtgacggtcacgacgtcgcgcgatatcgacgtggcggtcgccgcgaagctc
gcgaacctgtcgctcgacgaattccgctcgctgaacccgtcgttctcgaagccggtgatc
ctcggcgcgaccgagccgcagatcctgctgccgttcgacaacgcgtcggcgttcgagaag
aacctgaaagcctacaacggccagctttcgtcgtggaccacctatacggtcagcgaacgt
gcgcgaccggccgcgatcgccgagaagatcggcgtggacgccgatacgctgatgtcgatc
aacaagattccggccggcatgcgcctgaagccgggctcgacgatcgtcgtgccgcgcggc
gatgacgacgacgaggacatcagcgccgacgtcgccgaaaacggcgcgctcgcgatggaa
cccgatgtgcctgacacgcgcaagatgctgatccgcgtgcgccgcaagcagtcgatggcg
gcgatcgccggccgctacggcgtgtcggtcggccagctcaaggcgtggaaccgcacgcac
cgcgatctcgtgatgccgggccaggcgctcgtgctgcacgtgccggtcggccgttcggtg
ccggcggagcccggtccggaacggatcgcgacgtcggccgccggtgcgcacatcgagcgc
gcgagcctggcggtgggcggcaagtcgcacggcgcgaagcgcggcgcggcgaagccggcg
gccaaatcgacgaaagcgacgaaagcggcgccggccaaggccacaacgcacaagggcaag
aagaaataa
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