Burkholderia cepacia ATCC 25416: APZ15_10605
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Entry
APZ15_10605 CDS
T04772
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bcep
Burkholderia cepacia ATCC 25416
Pathway
bcep02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
APZ15_10605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcep03021
]
APZ15_10605
Transcription machinery [BR:
bcep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
APZ15_10605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_24
HTH_IclR
HTH_28
HTH_11
HTH_7
HTH_3
GerE
HTH_29
TnsD
PhyR_sigma-like
Xre-like-HTH
HTH_31
MarR_2
HTH_20
LacI
HTH_38
HTH_Tnp_ISL3
Trp_repressor
HTH_Crp_2
MarR
HTH_40
HVO_A0261_N
HTH_17
Phage_NinH
Motif
Other DBs
NCBI-ProteinID:
ALK18219
LinkDB
All DBs
Position
1:2332854..2333363
Genome browser
AA seq
169 aa
AA seq
DB search
MSADQLSLHREIDALYTGHHAWLRGWLSRKLGCAHRAADLAHDTFMRLLARDEPIGADEP
RAFLTTVAQRVLSNHWRREQIERAYLDALAQHPEAHAPSPEERAVVFETLLEIDRLLDGL
PLAAKRAFLLAQLDGLTQAEIARELGVSLATVKRYLVKAGTQCFFAMAA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgaccagctgtccctccatcgagaaatcgacgccctctataccggccaccac
gcgtggctgcgcggctggttgagccggaagctcggttgcgcgcaccgcgcggccgatctg
gcgcacgacaccttcatgcgcctgctcgcacgcgacgagccgatcggcgccgacgaaccg
cgcgcgttcctcaccacggtcgcgcagcgcgtgctgagtaaccactggcggcgcgagcag
atcgagcgcgcgtatctcgatgcgctcgcgcagcaccccgaagcgcatgcgccgtcgccg
gaggagcgggccgtcgtgttcgagacgctgctcgaaatcgaccggctgctcgacggcctg
ccgctcgcggcgaagcgagcgttcctgctcgcgcaactcgacgggctcacgcaggccgag
atcgcgcgcgaactcggcgtgtcgctcgcgacggtgaagcgttatctcgtgaaggccggc
acgcagtgtttcttcgcgatggcggcctga
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