Burkholderia cepacia ATCC 25416: APZ15_11050
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Entry
APZ15_11050 CDS
T04772
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bcep
Burkholderia cepacia ATCC 25416
Pathway
bcep03420
Nucleotide excision repair
bcep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
APZ15_11050
03430 Mismatch repair
APZ15_11050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcep03400
]
APZ15_11050
Enzymes [BR:
bcep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
APZ15_11050
DNA repair and recombination proteins [BR:
bcep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
APZ15_11050
MMR (mismatch excision repair)
Other MMR factors
APZ15_11050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
AAA_11
DUF8203
Motif
Other DBs
NCBI-ProteinID:
ALK18300
LinkDB
All DBs
Position
1:2437287..2439650
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AA seq
787 aa
AA seq
DB search
MPDLLANLNPEQLAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGYASPPTVLAVTF
TNKAAREMMARLSAMMPIDTRGMWIGTFHGLCNRMLRTHWRDAGLPQTFQILDTADQLSA
IKRLMKAANVDDEKYPPKNVQYFINNAKEQGLRPDKVDATDNFNRKFVELYQAYDQQCQR
EGVVDFPELLLRCYELLAYNAPLRAHYQARFRHILVDEFQDTNKLQYAWLKMLAGGQNAI
FAVGDDDQSIYAFRGANVGNMRDFEDEFRVRNLIKLEQNYRSHGNILDAANQLISNNAHR
LGKNLRTDAGHGEPVRVYEASTDSQEAGWIVEEIRSLINTGMARSEVAVLYRSNAQSRSI
EHTLMSSGIPYRVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFVRVVNFPTRGIGARSI
EQLADAARLYGCSMAAAIPYVTGKAGTSLGGFANLVAKMRADTQQMNLPDTVEHIVRASG
LADFYQGEREGQDRLENLQELVNAATAFIAEEGYGLDTPARSIPLRAGAIAAPELGSAAD
DQAVDVLDPVSPADPAQNPDTMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLE
FSAVFITGLEEGLFPHENSVLESDGLEEERRLMYVAITRAKERLYLSFAQSRMLHGQTRY
NVRSRFFDELPEHVLKWLTPKVEVGSRWGGRSDNAGYGRDWFARPGGGSREQIVDAAVSA
PLPAFANKQRAADTGFRVGQQVFHTKFGEGTVTALEGNGTDAKAQVKFKRHGEKWLALAV
AKLQAVE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacctgctcgccaatctgaaccccgaacaactcgccgccgtcacgttgccgaac
gaaccggcgctgatcctcgcaggggcgggcagcggcaagacccgcgtgctgatcacgcgc
atcgcgtggctgatccagcagggctacgcatcgccgcccaccgtgctcgccgtgaccttc
acgaacaaggccgcgcgcgagatgatggcgcgcctgtcggcgatgatgccgatcgacacg
cgcgggatgtggatcggcacgttccacggcctgtgcaaccggatgctgcgcacgcactgg
cgcgacgccggcctgccgcagaccttccagatcctcgacacggccgaccagctgtccgcg
atcaagcggctgatgaaggcggcgaacgtcgacgacgagaagtacccgccgaagaacgtc
cagtacttcatcaacaatgcgaaggagcaggggctgcgtcccgacaaggtcgacgcgacc
gacaacttcaaccgcaagttcgtcgagctgtaccaggcatacgaccagcagtgccagcgc
gagggcgtcgtcgatttccccgagctgctgctgcgctgctatgaattgctcgcgtacaac
gcgccgctgcgcgcgcactaccaggcgcgcttccggcacatcctcgtcgacgagttccag
gacaccaacaagctgcagtacgcgtggctcaagatgctcgcgggcggccagaacgcgatc
ttcgcggtcggcgacgacgatcagtcgatctacgcgttccgcggcgcgaacgtcggcaac
atgcgcgacttcgaagacgaattccgggtgcgcaacctgatcaagctcgagcagaactac
cggtcgcacggcaacatcctcgacgcggcgaaccagctgatctcgaacaacgcgcaccgc
ctcggcaagaacctgcgtaccgacgccggccacggcgaacccgtgcgcgtgtacgaggcg
agtaccgattcgcaggaagccggctggatcgtcgaggagatccgctcgctgatcaacacc
gggatggcgcgcagcgaagtggccgtcctgtaccgcagcaacgcgcagtcgcgctcgatc
gagcacacgctgatgtcgtcgggcatcccgtaccgcgtgtacggcggcctgcgcttcttc
gaacgccaggaagtgaagcacgcgctcgcgtacctgcgcctgatcgacaacccgaacgac
gacaccgcgttcgtgcgcgtcgtgaacttcccgacccgcggaatcggcgcgcgctcgatc
gagcagctcgccgacgccgcgcgcctgtacggctgctcgatggccgccgcgattccgtac
gtgacggggaaggccggcacgagcctcggcgggttcgcgaacctggtcgcgaagatgcgc
gccgacacgcagcagatgaacctgcccgacaccgtcgagcacatcgtgcgcgccagcggt
ctcgccgatttctaccagggcgagcgcgaaggccaggaccgtctcgagaacttgcaggaa
ctcgtgaacgcggccaccgcgttcattgccgaggagggctacgggctcgacacgccggcc
cgttcgattccgctgcgcgcaggcgcgatcgcggccccggagctcggctctgcggcggac
gatcaggcggtcgacgtgctcgacccggtatcgcctgccgatccggcacagaaccccgat
acgatgacgccgctcgccggtttcctgtcgcatgcgtcgctggaggccggcgacaaccag
gcgcaggccggccaggacgccgtgcagctgatgacggtgcacgcggcgaaggggctcgaa
ttctcggccgtgttcatcacgggcctcgaggaagggctgttcccgcacgagaacagcgtg
ctcgaatcggacggcctcgaggaagagcgccggctgatgtacgtcgcgatcacgcgcgcg
aaggagcggctctacctgtcgttcgcgcagagccggatgctgcatggccagacgcgttac
aacgtgcgctcgcgcttcttcgacgagctgcccgaacacgtgctcaagtggctgacgccg
aaggtcgaggtcggttcacgctggggtggccggtcggacaacgccgggtacgggcgcgac
tggttcgcgcggccgggcggcggcagtcgcgagcagatcgtcgatgcggccgtgtccgcg
ccgctgccggcgttcgcgaacaagcagcgggccgccgataccggtttccgcgtcggccag
caggtgttccataccaagttcggcgaaggcacggtcaccgcgctcgaaggcaacggcacc
gatgcgaaggcacaggtgaaattcaagcggcacggcgagaagtggctcgcgctcgcggtc
gcgaaactgcaggcggtggaatga
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