Burkholderia cepacia ATCC 25416: APZ15_11230
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Entry
APZ15_11230 CDS
T04772
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
bcep
Burkholderia cepacia ATCC 25416
Pathway
bcep00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
APZ15_11230
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bcep01007
]
APZ15_11230
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcep03016
]
APZ15_11230
Enzymes [BR:
bcep01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
APZ15_11230
Amino acid related enzymes [BR:
bcep01007
]
Aminoacyl-tRNA synthetase
Class II (U)
APZ15_11230
Transfer RNA biogenesis [BR:
bcep03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
APZ15_11230
Prokaryotic type
APZ15_11230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
B5
tRNA_bind
FDX-ACB
VapB_antitoxin
Motif
Other DBs
NCBI-ProteinID:
ALK18334
LinkDB
All DBs
Position
1:2476895..2479324
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AA seq
809 aa
AA seq
DB search
MQFPESWLRTFVDPQLTTDELSHALTMAGLEVESLSKAAPPTSKIVVGRVLEVVKHPDAD
KLNVCQVDAGTGATLNIVCGAPNVAPGIKVPVALVGAELPPAEEGGKPFAIKLSKLRGVE
SQGMLCSARELKLSEDHSGLLVLPEDTPVGQDIRETLNLDDTIFEIKLTPNKADCLSVFG
IARETAAITGAPLTPVDIRPVRVELDETLPVRIAAPDLCGRFSGRVIRGVNARAKTPRWM
IERLERSGQRSVSALVDISNYVMFELGRPSHVFDLDKIHGGIEVRWGKRGESLKLLNGNT
VELDETVGVISDDRQVESLAGIMGGDSTAVTLDTTNIYLEAAFWWPDSIRGRARKYNFST
DAAHRFERGVDYATTVEHVERITQLILEICGGKAGPVDDQSVNLPQRAPVKMRVSRANRI
IGVQIGADEIASIFTRLGLPFEREDDAFLVTPPSHRFDIEIEEDLIEEVARIYGFEKIPA
RPPVATSEMRATNETRRSIHDVRHALAARDYAETVNFSFVDAEWEQDFAGNDQPIRLLNP
IASQLSVMRTTLFGSLISVLRHNLNRRADRVRVFEAGRVFLADASAKAGELTVEGYVQPK
RVGALAYGPVLDEQWGVATRAVDFFDVKGDLEALLAPAAARVVKAEHPALHPGRSARIEV
DGRAVGWIGELHPRLMQKYELPHAPVMFEIDADALIARALPTPTEVSKFPPVRRDIAVVV
DQAVEVQALFDEMKKALAEEACRFVQKVVLFDEFRAKSNTSGGLAAHEKSLAFRVTLQDA
AGTLQDEVVDQAIQALVERMARAGARLRG
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgcaattccctgaatcctggttgagaacctttgtcgacccgcagctgacgaccgacgaa
ctgtcgcacgcgctgacgatggcggggctcgaagtcgaatcgctgagcaaggctgcgccg
ccgacgtcgaagatcgtcgtcggccgcgtgctcgaagtcgtcaagcatccggatgcggac
aagctcaatgtctgccaggtcgatgccggcaccggcgcgacgctgaatatcgtctgcggc
gcaccgaacgtcgcgcccggcatcaaggtgccggtcgcgctggtcggcgcggagctgccg
ccggcggaagagggtggcaagccgttcgcgatcaagctgtcgaagctgcgcggcgtggag
agccaggggatgctgtgctcggcacgtgaactgaagctgtccgaggatcacagcggcctg
ctggtgctgccggaagatacaccggtcggccaggacatccgcgagacgctcaatctcgac
gacacgatcttcgaaatcaagctgacgccgaacaaggccgactgcctgtccgtgttcggc
attgcgcgcgagacggccgcgatcaccggtgcgccgctgacgccggtcgatatccgcccg
gtgcgcgtcgaactcgacgaaacgctgccggtgcgcattgccgcccccgatctgtgcggt
cgcttctcgggtcgcgtgatccgcggcgtgaacgcgcgtgcgaagaccccgcggtggatg
atcgagcgcctcgagcgctccggccagcgcagcgtgtcggcgctcgtcgacatctcgaac
tacgtgatgttcgagctcggccgcccgtcgcacgtgttcgatctcgacaagatccacggt
ggcatcgaggtgcgctggggcaagcgcggcgaatcgctgaagctgctcaacggcaacacg
gtcgaactcgacgaaacggtcggcgtcatttcggatgaccgccaggtcgaaagcctggcc
ggcatcatgggcggcgacagcacggccgtcacgctcgacacgaccaacatctacctggaa
gccgcgttctggtggccggacagcatccgcggccgcgcgcgcaagtacaacttctcgacc
gatgcggctcatcgcttcgagcgcggcgtcgattacgcgacgaccgtcgagcacgtcgag
cgcatcacgcagctgatcctcgagatctgcggcggcaaggccggcccggtcgacgatcag
tccgtgaacctgccgcagcgcgcgccggtgaagatgcgcgtgtcgcgcgcgaaccgcatc
atcggcgtgcagatcggcgccgacgagatcgccagcatcttcacgcgcctcggcctgccg
ttcgagcgtgaagacgacgcgttcctcgtcacgccgccgtcgcatcgcttcgacatcgag
atcgaggaagacctgatcgaggaggtcgcgcggatctacggcttcgagaagatcccggcg
cgtccgccggtcgcgacgagcgaaatgcgcgcgaccaacgagacgcggcgttcgatccac
gatgtccgtcacgcgctcgccgcgcgcgactacgcggaaaccgtcaacttcagcttcgtc
gatgcggagtgggagcaggatttcgcgggcaacgaccagccgatccgcctgctgaacccg
atcgcgagccagctctcggtgatgcgcacgacgctgttcggcagcctgatttccgtgctg
cgccacaacctgaaccgccgtgcagatcgcgtgcgcgtgttcgaggctggccgtgtgttc
ctcgccgatgcgtcggcgaaggccggcgagctgacggtcgagggctacgtgcagccgaag
cgcgtcggtgcgcttgcctatggcccggtgctcgacgagcagtggggcgtggcgacccgt
gcggtcgatttcttcgacgtgaagggcgatctcgaggcgctgctcgcgccggcagccgca
cgcgtcgtgaaggcggagcatccggccctccatccggggcgcagcgcgcgaatcgaagtt
gacggccgtgcggttggctggatcggcgagttgcacccgcgcctgatgcagaagtacgag
ctgccgcacgctccggtgatgttcgaaatcgacgcggacgcgctgattgcgcgtgcgttg
cccacgccgaccgaggtgtcgaaattcccgccggttcgtcgcgatatcgccgttgtcgtc
gatcaggcggtcgaggttcaggcacttttcgacgaaatgaagaaggcgcttgccgaagag
gcctgccgattcgttcagaaggttgtactcttcgacgaatttcgtgcaaaatcaaatact
tccggtggccttgccgcgcacgagaagagccttgccttccgcgtgacgctgcaggacgcg
gctggcacgctacaggacgaggtcgtcgatcaggcgatccaggcgctggtcgagcggatg
gctcgcgccggtgcgcgcctgcgcggctaa
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