Burkholderia cepacia ATCC 25416: APZ15_11345
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Entry
APZ15_11345 CDS
T04772
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bcep
Burkholderia cepacia ATCC 25416
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcep03016
]
APZ15_11345 (truB)
Enzymes [BR:
bcep01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
APZ15_11345 (truB)
Transfer RNA biogenesis [BR:
bcep03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
APZ15_11345 (truB)
Prokaryotic type
APZ15_11345 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ALK18355
LinkDB
All DBs
Position
1:2502056..2502988
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AA seq
310 aa
AA seq
DB search
MTTAASQRPRVPRRVLDGVLLLDKPVGLSSNDALIRAKRLLLAKKAGHTGTLDPLASGLL
PLCFGEATKFSQDLLEADKTYEATMRLGQRTATGDAEGEVIDTRPVECDRAAVEAALARF
TGEIVQVPPMYSALKRDGKPLYEYARAGQTVEREGRNVTILALDLLACDLPDVTFRVTCS
KGTYVRTLAEDIGEALGCGAHLTMLRRTGVGALTLEHAVTLDALSDADEAARDAWLQPVD
ALLSTFPLVRLDETSAKRFLHGQRLPLSSLDPIDATEGGRVRVYDATRLLGVARKANGVL
APERLVVTAA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgcagcatcccaacgtccgcgcgtgccccggcgcgtgctggacggcgtcctc
ctgctcgacaagccggtcggcctttcgagcaacgatgcactgattcgcgcgaagcgcctg
ctgctcgcgaagaaagccggtcacaccggtacgctcgatcccctggcttcgggtttgctg
ccgctgtgtttcggcgaggcgacgaagttctcgcaggatctgctcgaagcggacaagacc
tacgaagcgacgatgcgtctcggccagcgtacggctaccggcgacgcggaaggcgaggtg
atcgacacgcgccccgtcgaatgcgaccgtgcggcggtggaagccgcgctggcgcgcttc
accggcgagatcgtgcaggtgccgccgatgtattcggcgctcaagcgcgatggcaaaccg
ctgtatgaatatgcgcgcgcggggcaaaccgtcgagcgcgagggccgcaacgtgacgatc
ctcgccctcgacctgctcgcgtgcgacctgcctgacgtgacgtttcgcgtgacctgcagc
aagggcacttatgtgcgcacgctggcagaggatatcggcgaggcgctcggttgcggtgcg
catctgacgatgctgcggcgcacgggcgtcggcgcgctgacgctcgagcatgcggtaacg
ctcgatgcgctgtccgatgccgacgaagcggcacgtgatgcgtggctccagccggtcgat
gcgttgctgtcgacgtttccgctggttcgtctcgatgaaaccagcgcgaagcggttcctg
cacgggcagcgtttgccgctgtcgtcgctcgacccgatcgacgcgaccgaaggcgggcgt
gtgcgcgtctacgacgcgactcgcctgctcggcgtggcccgcaaggcaaacggcgtgctg
gcgccggagcggctcgtcgtcacggcagcctga
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integrated database retrieval system
