Burkholderia cepacia ATCC 25416: APZ15_13785
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Entry
APZ15_13785 CDS
T04772
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bcep
Burkholderia cepacia ATCC 25416
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcep03009
]
APZ15_13785 (rimO)
Enzymes [BR:
bcep01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
APZ15_13785 (rimO)
Ribosome biogenesis [BR:
bcep03009
]
Prokaryotic type
ribosomal protein modification factors
APZ15_13785 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ALK18784
LinkDB
All DBs
Position
1:complement(2988869..2990230)
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AA seq
453 aa
AA seq
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MSQSPKVGFVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTCGFIDEAVQES
LDAIGEALTENGKVIVTGCLGAKSSASGSNLIEEVHPKVLAVTGPHAVGEVMQAVHSHLP
KPHDPFTDLVPAAGIKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVAEVMLEAE
NLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGKPIKTRMTDLVAALGELAAQYGAWVRL
HYVYPYPSVDEVIPLMAEGPFKGHVLPYLDVPFQHAHPEVLKRMKRPANAEKVLERVQKW
REICPDLTIRSTFIAGFPGETEEQFETLLDFIREAELDRVGCFAYSPVEGATANELDGAL
PDEVREERRARFMEVAEEVSANRIQRKVGKTLKVLIDEVSEEGGIGRTAADAPEIDGVVY
VEPAAKASKRYKVGDFVSVKITGADGHDLWGEV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaatcccccaaagtagggttcgtttcgcttggttgcccgaaagccctcgtcgat
tccgaacagatcatcacgcaactgcgtgccgaaggttatgaaatctccggcacctacgac
ggcgccgacctcgtcgtcgtgaacacctgcggcttcatcgacgaagccgtgcaggaaagc
ctcgacgcgatcggcgaagcgctgaccgagaacggcaaggtgatcgtcaccggctgtctc
ggcgcgaagtcgagcgccagcggctcgaacctgatcgaggaagtccatccgaaggtgctc
gccgtcaccggcccgcacgcggtgggcgaagtgatgcaggccgtgcattcgcacctgccg
aagccgcacgacccgttcaccgacctcgtgccggcggccggcatcaagctcacgccgcgc
cactacgcgtacctgaagatctccgaaggctgcaaccaccgctgcacgttctgcatcatc
ccgtcgatgcgcggcgacctcgtgtcgcgcccggtcgccgaagtgatgctggaagccgag
aacctcttcaagtcgggcgtgaaggaactgctcgtgatctcgcaggacacgagcgcgtac
ggcgtcgacgtgaagtaccgcacgggcttctggaacggcaagccgatcaagacgcgcatg
accgacctggtcgccgcgctcggcgaactcgcggcacagtacggcgcatgggtgcgcctg
cactacgtgtacccgtacccgagcgtcgacgaagtgattccgctgatggccgaaggtccg
ttcaagggccacgtgctgccgtatctcgacgtgccgttccagcacgcgcatccggaagtg
ctgaagcgcatgaagcgtccggcgaacgccgagaaggtgctcgagcgcgtgcagaagtgg
cgcgagatctgcccggacctgacgatccgcagcacgttcattgcgggcttccccggcgag
acggaagagcagttcgaaacgctgctcgacttcatccgcgaggcggaactcgatcgcgtc
ggctgcttcgcgtattcgccggtcgaaggcgcgacggcaaacgaactcgacggcgcgctg
ccggatgaggttcgcgaggagcgtcgcgcacgcttcatggaagtcgccgaggaagtgtcg
gcgaaccgcattcagcgcaaggtcggcaagaccctcaaggtgctgatcgacgaagtcagc
gaggaaggcgggatcggccgcacggcggccgatgcgccggagatcgacggcgtcgtctat
gtcgagccggcggcgaaggcctcgaagcgctacaaggtcggcgatttcgtgtccgtgaag
atcacgggcgccgacggccacgatctgtggggcgaggtgtaa
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