Burkholderia cepacia ATCC 25416: APZ15_14090
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Entry
APZ15_14090 CDS
T04772
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bcep
Burkholderia cepacia ATCC 25416
Pathway
bcep03030
DNA replication
bcep03430
Mismatch repair
bcep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APZ15_14090
03430 Mismatch repair
APZ15_14090
03440 Homologous recombination
APZ15_14090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcep03032
]
APZ15_14090
03400 DNA repair and recombination proteins [BR:
bcep03400
]
APZ15_14090
Enzymes [BR:
bcep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APZ15_14090
DNA replication proteins [BR:
bcep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APZ15_14090
DNA repair and recombination proteins [BR:
bcep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APZ15_14090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_14
AAA_22
AAA_5
AAA_assoc_2
AAA_18
AAA_30
TsaE
Mg_chelatase
AAA_2
DUF3646
Glyco_tranf_2_5
AAA_24
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ALK18835
LinkDB
All DBs
Position
1:complement(3054303..3056660)
Genome browser
AA seq
785 aa
AA seq
DB search
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGVTSQPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLERILGEEHITFEPQALRLLARAAQGSMRDALSLTDQAIAYSANEVTESAVSGM
LGALDQTYMVRLLDALAAGSGPEILAIADEMSLRSLSFSTALQDLASLLHRIAWAQFAPG
SVLDEWPEAGDLRRFAETLSPEQVQLFYQIATVGRAELGLAPDEYAGFTMTLLRMLAFEP
AVATGSAPGGQPSVPRAVPGPRVAAASAAVAKPVSAAPVEAARPQATATAAPAAPVVRAA
PAPAGGEADQPAEKPAAVPASPAQVDEPVVDTPQPRVAAVPQAEPASERPTPARNEPEPP
AAVVQRSDTPAAPAEPVPRAASPEPAARPAARSGGAAAALDVLRNAGMRVSSDRGRAGAA
AKPAAQPAAEKPVAPRPAAVQVPTPRAAARAPQAADARQAPPPWEDIPPDEYVPLSADEM
FGGPPDDGFVPVFDSGPDDVRVTPKPAEARPSAPVDTRPLPPAIALDPVGFDGEWPALAA
RLPLKGVAYQLAFNSELTAVDATTLKLSVPVPQYADAAQVAKLKAALADALGKPVEVAVE
IGPARRTAAALDAAARAARQREAEQEIHGDPFVQQLVRDFGARIVEGSVRPLADAAPDGP
PPTLH
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagttctcgcacgcaagtggcgtccgaaggatttcgcttcgctcgtcggc
caggagcacgtcgtcagggcgctcacgcacgcgctcgacggcgggcgtctccatcacgcc
tatctgtttaccggaacccgcggtgtcggcaagacgacgctgtcgcggatcttcgccaag
gcactcaactgtgaaaccggcgtcacgtcgcagccgtgcggcgtgtgtcgcgcctgtcgc
gagatcgacgaagggcgtttcgtcgattacgtcgagatggatgccgcgagcaaccgcggc
gtcgatgaaatggccgcgctgctcgagcgcgccgtgtacgcgcccgtcgatgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctgacgaatcacgcgttcaacgcgatgctg
aagacgctcgaagagccgccgccgcacgtcaagttcatccttgcgacgaccgatccgcag
aaaattcccgtcaccgtgctgtcgcgctgtctgcagttcaacctgaagcagatgccggcc
gggcatatcgtgtcgcatctcgaacggattctcggcgaagaacacatcacgttcgagccg
caggcgctgcgcctgctcgcgcgtgccgcgcagggcagcatgcgtgacgcgctgtccctc
accgaccaggcgatcgcctattcggcaaacgaggtgaccgagtcggccgtgtcgggcatg
ctcggcgcgctcgaccagacttacatggtgcgtctgctcgacgcgcttgccgcgggcagc
ggccccgaaatccttgcgattgccgacgagatgtcgctgcgcagcctgtcgttctcgacc
gcgcttcaggatctcgcgagcctgctgcaccggatcgcgtgggcgcagttcgcgccgggc
tcggtgcttgacgaatggcccgaagcgggcgacctgcgccgcttcgcggagacgctgagc
cccgagcaggtccagctgttctatcagatcgcgacggtcggccgcgcggaactcggcctg
gcgccggacgaatacgccggtttcacgatgacgctgctgcggatgctcgcgttcgagccg
gctgtggcaaccggcagcgcgccgggcggacagccgtccgtgccgcgtgcggtgccgggg
ccgcgcgtggcggcggcgtcggctgccgtggcgaagccggtatccgccgcacctgtcgag
gcagcgcggccgcaggctacggcaacggccgcgccagcggcgccggttgtgcgtgcggcg
ccggcaccggctggcggcgaagcagaccagccggctgagaagccggctgccgtcccggca
tccccggcccaggttgatgagccggtcgtcgatacgccgcagccgcgcgtggccgcagta
ccgcaagcggagccggccagcgagaggccgacacccgcccgcaatgaacccgagccgccg
gctgcggttgtgcagcgaagcgacacgccggctgcgccggccgaaccggtgccgcgcgct
gcgtcgcccgagcccgccgcccgtccggcagcgcgttccgggggagccgccgccgcgctg
gacgtgctgcgcaatgcggggatgcgcgtgtcgtccgaccgcggtcgtgcaggcgccgcc
gcgaaaccggccgcccagccggccgccgagaagcccgtcgcgccgcgtcccgccgccgta
caggtaccgacgccgcgcgcggcggcccgtgcgccgcaggcagccgatgcacgtcaggcc
ccgccgccgtgggaggacatcccgccggacgaatacgtgccgctcagtgccgacgagatg
tttggcggcccgcccgacgacggcttcgtgccggtattcgacagcggccccgacgatgtg
cgcgtgacgccgaagccggcggaagcccgcccgtccgctccggtcgacacgcgtccgctg
ccgcccgcgatcgcgctcgatccggtcggcttcgatggcgagtggccggcgctggccgcg
cggctgccgctcaagggcgtcgcgtaccagctcgcgttcaacagcgagctgacggccgtc
gatgcgactacgttgaaactttcagtgccggtgccgcaatatgcggacgctgcgcaggtg
gcgaagctgaaggccgcgctggccgatgcgctcggcaaaccggtcgaggtggccgtcgaa
atcgggcccgcccggcgtacggcggcggcactcgatgcggctgcgcgcgcagcacgccag
cgtgaggccgagcaggagattcacggcgatccgttcgtccagcagctcgtgcgcgacttc
ggtgcgcgcatcgtcgagggttcggtgcgcccgctcgccgacgcggcgccggacggcccg
ccgccgacgctgcattga
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