Burkholderia cepacia ATCC 25416: APZ15_14890
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Entry
APZ15_14890 CDS
T04772
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bcep
Burkholderia cepacia ATCC 25416
Pathway
bcep03030
DNA replication
bcep03430
Mismatch repair
bcep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APZ15_14890
03430 Mismatch repair
APZ15_14890
03440 Homologous recombination
APZ15_14890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcep03032
]
APZ15_14890
03400 DNA repair and recombination proteins [BR:
bcep03400
]
APZ15_14890
Enzymes [BR:
bcep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APZ15_14890
DNA replication proteins [BR:
bcep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APZ15_14890
DNA repair and recombination proteins [BR:
bcep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APZ15_14890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Peripla_BP_3
Autoind_synth
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ALK18987
LinkDB
All DBs
Position
1:3225455..3226072
Genome browser
AA seq
205 aa
AA seq
DB search
MQTVAVLDFETTGLSPNLGDRATEIAVILLRDGQVVDRFQSLMNAGRRIPSDVVALTGIT
NEMIASAPPTSKVMKEAAAFVGKHAVVAHNAGFDKRFWQAELGLLGMTAEHAFACTMLVA
RRIYPDALSHRLSSLADMLRLPKSGRAHRAMVDAEMASHLWCRLQQDIARTYGLDRIDHA
LMTRVQATAKAKVPMYLRSLAGAHA
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccgttgcggtactggacttcgaaacaaccggactttcgccgaacctgggtgat
cgtgcgaccgaaatcgccgtcatcctcctccgcgacggacaagtcgtcgatcgtttccag
agcctgatgaatgcaggcagacgcataccgtcggacgtggtcgcgctgaccggcatcacg
aacgagatgatcgcatcggcgcctccgacatcgaaagtcatgaaggaagcggctgcgttc
gtcggcaaacacgcggtcgtcgcccacaacgccggtttcgacaaacggttctggcaggcg
gaactcgggctgcttggcatgacggccgagcatgcctttgcctgcacgatgctcgtggcg
cggcgcatttacccggacgcgctgagtcatcgcctgtcgagcctcgcggacatgctgcga
ttgccgaaatcggggcgggcgcaccgggcgatggtcgatgccgaaatggccagccacctg
tggtgcaggctgcagcaggacattgcccggacttacgggctggatcgtatcgatcacgcg
ctcatgacgcgtgtccaggcaacggcgaaggcgaaagtgccgatgtacctgcgctcgctc
gcgggcgcgcatgcgtga
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integrated database retrieval system
