Burkholderia cepacia ATCC 25416: APZ15_16140
Help
Entry
APZ15_16140 CDS
T04772
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bcep
Burkholderia cepacia ATCC 25416
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcep03400
]
APZ15_16140
Enzymes [BR:
bcep01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
APZ15_16140
DNA repair and recombination proteins [BR:
bcep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
APZ15_16140
Prokaryotic type
APZ15_16140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ALK19209
LinkDB
All DBs
Position
1:complement(3495480..3496958)
Genome browser
AA seq
492 aa
AA seq
DB search
MPAKSSVAPAIVWFRDDLRVTDQPALTRAVASGRPLVCVFVDDTGVGAGRAPGGAARWWL
HGSLAGLDAALARHGGRLLLLRGDAPREIERVVHDTGAQAVYWNRRYAQPQRDADAALKA
SLKARGVTVESSNGSLLNEPWEVLTGSGGPYQVFTAYWRAARRDRAVAAPLPEPERIGFH
RWPKAVSDRALALDALALRPPAPDWAGGLRDAWPAPDEGGAHAQLDAFLTTSLADYADAR
DRPDRPATSRLSPFLRFGNVSPRQVWHAVQGAAQAGGAACAAGADKFLSELGWREFSYTL
LYHFPALATDNFRAQFDAMPWRDDPAALRAWQRGLTGYPLVDAGLRELWTTGWMHNRVRM
VVASFLIKHLLIDWRAGETWFWDTLVDADPANNAASWQWVAGCGADAAPYFRIFNPVAQG
RKFDPDGAYVRRWVPELTGLDAASIHAPWEASPLELEAAGVRLGVDYPEPLVEHAAARAR
ALDALAALPKRR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgccaagtcgtccgttgctcccgcgatcgtctggttccgcgacgatctgcgcgtg
accgaccagcccgcgctgacgcgcgcggtggcgtcgggccggccgctcgtatgcgtattc
gtcgacgacacgggcgtcggcgccgggcgcgcgcccggcggcgcggcgcgctggtggctg
cacgggtcgctggccgggctcgacgcggcgcttgcgcgtcatggcggacgcctgctgctg
ttgcgcggcgacgcgccgcgcgagatcgaacgcgtcgtgcacgacacgggtgcgcaagcg
gtgtactggaaccgtcgttatgcgcaaccgcagcgcgacgccgacgcggcgctgaaggcg
tcgctcaaggcgcgcggcgtcacggtcgagagcagcaacggcagcctgttgaacgagccg
tgggaggtgctgacgggcagcggcgggccgtaccaggtgttcaccgcgtactggcgcgcg
gcgcgccgcgatcgcgcggtggccgcgccgctgcccgagcccgaacggatcgggtttcat
cgctggccgaaggccgtgagcgaccgcgcactggcgctcgatgcgctggcattgcgtccg
ccggcgccggattgggccggcggcctgcgcgacgcgtggcccgcgcccgacgaaggcggc
gcgcacgcgcagctcgacgcgtttctgacgacctcgctcgccgattacgcggatgcgcgc
gaccgtcccgaccgccccgcgacgagccggctgtcgccgttcctgcgcttcggcaacgtg
tcgccgcgacaggtgtggcacgcggtgcagggcgccgcgcaggccggcggcgcggcatgc
gcggccggcgccgacaagttcctgagcgaactcggctggcgcgaattcagctacacgctg
ctgtatcactttccggcactcgcgaccgacaacttccgcgcgcagttcgatgcaatgccg
tggcgcgacgatcccgccgcgctgcgcgcgtggcagcgcgggctgaccggctatccgctc
gtcgatgcgggcctgcgcgaactgtggacgaccggctggatgcacaaccgcgtgcggatg
gtcgtcgcgtcgttcctgatcaagcatctgctgatcgactggcgcgcgggcgaaacgtgg
ttctgggacacgctggtcgacgccgatcccgcgaacaacgcggcgagctggcagtgggtg
gccggctgcggtgccgacgccgcgccgtatttccgcatcttcaatccggtcgcgcagggg
cggaagttcgacccggacggcgcgtacgtgcggcgctgggtgcccgagctgaccggcctc
gacgccgcatcgatccacgcgccgtgggaagcttcgccgctggaactcgaagcggcaggc
gtgcggctcggcgtcgactatccggaaccgctcgtcgagcatgcggccgcgcgtgcccgc
gcgctcgatgcgctggccgcattgccgaagcgccgctga
DBGET
integrated database retrieval system
