Burkholderia cepacia ATCC 25416: APZ15_16915
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Entry
APZ15_16915 CDS
T04772
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bcep
Burkholderia cepacia ATCC 25416
Pathway
bcep03030
DNA replication
bcep03430
Mismatch repair
bcep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APZ15_16915 (dnaE)
03430 Mismatch repair
APZ15_16915 (dnaE)
03440 Homologous recombination
APZ15_16915 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcep03032
]
APZ15_16915 (dnaE)
03400 DNA repair and recombination proteins [BR:
bcep03400
]
APZ15_16915 (dnaE)
Enzymes [BR:
bcep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APZ15_16915 (dnaE)
DNA replication proteins [BR:
bcep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
APZ15_16915 (dnaE)
DNA repair and recombination proteins [BR:
bcep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
APZ15_16915 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RecG_wedge
DUF655
Motif
Other DBs
NCBI-ProteinID:
ALK19349
UniProt:
A0A806UWR6
LinkDB
All DBs
Position
1:complement(3653313..3656846)
Genome browser
AA seq
1177 aa
AA seq
DB search
MSDPRFVHLRVHSEFSIADGIVRIDDIVKAAAADGQGALALTDLGNAFGLVRFYQEARGK
GIKPIAGCDVWIANPDDRDKPSRLLLLVKDKVGYLNLCELLSKAWLTNQYRGRAELDASW
LDGELAQGLLALSGAQQGDIGLAFAAGNEEAARRHAERWAKVFPGGFYIELQRYGQPGAE
AYIQQAATLAAALKLPVVATHPTQFMTDDDFTAHEARVCISEGDILANPRRQKRFTTDQY
FRTQDDMAALFADLPSAIANTVEIAKRCNLKLELGKPKLPLFPTPDGMSLDDYLVQLSKE
GLETRLAQLYPAEAERDAQRDTYYKRLEFECGTITKMGFPGYFLIVADFINWAKNNGVPV
GPGRGSGAGSLVAYALGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVIQYV
KEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYMFTDGIAKLIPFKPGKHVTIADAMK
EEPQLQERYDHEDEVHQLLDLAQRVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGDDGG
VVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRRLDPSKSDWSLAQVPLDDPASFQ
ILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVSLYRPGPMDLIPSFCARKHGREK
VDYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAKHRE
IFAEGAAKNGLTREKSDEIFDLMEKFAGYGFNKSHAAAYALLAYHTAWLKAHHPAEFMAA
NMTLAMDDTDKVKILFDDCIVNNLAVLPPDINQSHYRFEPVAEADGKRSRTIRYGLGAVK
GSGQNAIEEILRAREEKPFTDLFDFCERIDRRVVNRRTVEALIRAGAFDSLNTNRAQLIA
SVPLAMEAADQAEANAMQAGLFDMGAESPHAHALVDEPAWDDKRRLQEEKGALGFYLSGH
LFDAYRDEVRRFVRQKVGDLKEGRDKLVAGIIASLRTQMTQRGKMLIALLDDGSGQCEIT
IFNEQFEANKALFKEDELLIVQGQARNDAFTGGIRFTADTVMDLERARSRYAQAVRLTMN
GNADAAALRRVLEPHVSKDDPAATAAVEAPAPRGGGRDGGRRPQAPLPNGLAVQVHYSNA
RAQGEMRLGDAWRVKPSDVLLAELRAAFDGSVVEITY
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatccccgcttcgtccatcttcgcgttcactccgaattctcgattgccgacggc
atcgtgcgcattgacgacatcgtcaaggcggcggccgcggacggtcagggcgcgctcgcg
ctcaccgatctcggcaacgcattcggcctcgtccgtttctaccaggaagcccgcggcaag
ggcatcaagccgatcgccggctgcgacgtctggatcgccaatcccgacgaccgcgacaag
ccgtcgcggctgctgctgctcgtcaaggacaaggtcggctacctgaatctctgcgagctg
ctgtcgaaggcgtggctcacgaaccagtaccgcggccgtgcggaactcgacgcgagctgg
ctcgacggcgagctcgcgcaggggctcctcgcgctgtcgggcgcgcaacagggcgatatc
gggctcgcgtttgccgcgggcaacgaagaagccgcgcgccgtcacgccgagcgctgggcg
aaggtgttcccgggcggcttctacatcgagctgcagcgttacggccagccgggcgccgag
gcgtacatccagcaggccgcgacgctcgccgcggcgctgaagctgccggtcgtcgcgacg
cacccgacgcagttcatgaccgacgacgatttcaccgcgcacgaggcgcgcgtgtgtatc
tcggaaggcgacatcctcgcgaatccgcggcgccagaagcgtttcacgaccgaccagtat
ttccgcacgcaggacgacatggccgcgctgttcgccgacctgccgtcggcgatcgcgaac
acggtcgagatcgcgaagcgctgcaacctgaagctcgagctcggcaagccgaagctgccg
ctgttcccgacgccggacggcatgtcgctcgacgactacctcgtccagctgtcgaaggaa
gggctcgagacgcgtctcgcgcagctgtatccggccgaagccgaacgcgacgcgcagcgc
gacacgtactacaagcgcctcgaattcgaatgcgggaccatcacgaagatgggctttccc
ggctacttcctgatcgtcgcggacttcatcaactgggcgaagaacaacggcgtgccggtc
ggcccgggccgcggctcgggcgccggttcgctggtcgcgtacgcgctcggcattaccgat
ctcgacccgctgcgctacaacctgctgttcgagcgtttcctgaacccggaacgcgtgtcg
atgcccgacttcgacatcgacttctgccagcacggccgcgatcgcgtgatccagtacgtg
aaggaaaaatacggcgcggacgccgtgtcgcagatcgccaccttcggcacgatggccgcg
aaggcggccgtgcgcgacatcggccgcgtgctcgacctcggctacatgttcaccgacggc
atcgcgaagctgatcccgttcaagccgggcaagcacgtgacgatcgccgacgcgatgaag
gaggagccgcagcttcaggagcgctacgaccacgaggacgaagtgcaccagttgctcgac
ctcgcgcagcgcgtcgagggcctcacgcgtaacgtcgggatgcacgcgggcggcgtgctg
atcgcgcccggcaagctgaccgatttctgcccgctgtacacgcagggcgacgacggcggc
gtggtcagccagtacgacaaggacgacgtcgaagccgtcggcctcgtgaagttcgacttt
ctgggtctcacgacgctgacgatcctcgactgggccgagcgctacatccgccgcctcgat
ccgtcgaagtccgactggtcgctcgcgcaggtgccgctcgacgatcccgcctcgttccag
atcctgaagaaggccaacacggtcgccgtgttccagctggaaagccgcgggatgcagggc
atgctgaaggatgcgcagcccgaccgcttcgaggacatcatcgcgctcgtgtcgttgtac
cgtccgggcccgatggacctgatcccgagcttctgcgcacggaagcacggccgcgagaag
gtcgactatccggatccgcgcgtcgaacccgtcctgaaagagacctacggcatcatggtc
tatcaggagcaggtgatgcagatggcgcagatcatcggcggctactcgctcggcggcgcg
gacttgctgcgtcgcgcgatgggcaagaagaagcccgaggagatggccaagcatcgcgag
atcttcgccgagggtgcggcgaagaacggcctcacgcgcgagaagtccgacgagatcttc
gacttgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggctgcctacgca
ctgctcgcgtatcacaccgcgtggctgaaggcgcaccatccggccgaattcatggcggcc
aacatgacgctcgcgatggacgacaccgacaaggtgaagatcctgttcgacgattgcatc
gtgaacaacctcgccgtgctgccgcccgacatcaaccagtcgcattaccgcttcgagccg
gtcgcggaagccgacggcaagcgctcgcgcacgatccgctacggcctcggcgccgtgaag
ggcagcggccagaacgcgatcgaggaaatcctgcgcgcccgcgaggaaaagccattcacc
gacctgttcgacttctgcgagcggatcgaccggcgcgtcgtcaaccgccgcacggtcgag
gcgctgatccgcgccggtgcattcgattcgctgaatacgaaccgtgcccagctgatcgcg
tcggtgccgctggcgatggaagcggccgaccaggccgaggcgaacgcgatgcaggccggc
ctgttcgacatgggcgccgaatcgccgcacgcgcatgcgctcgtcgacgagcccgcgtgg
gacgacaagcgccgcctgcaggaagaaaagggtgcgctcggcttctacctgtccggccac
ctgttcgacgcgtatcgcgacgaggtgcgccgtttcgtgcggcagaaggtcggcgacctg
aaggaagggcgcgacaagctcgtggccggcatcatcgcttcgctgcgcacgcagatgacc
cagcgcggcaagatgctgatcgcgctgctcgacgacggctcgggccagtgcgagatcacg
atcttcaacgagcagttcgaggcaaacaaggcgctgttcaaggaagacgaactgctgatc
gtgcaggggcaggcgcgcaacgatgcgttcacgggcggcatccgcttcacggccgacacg
gtgatggatctcgaacgcgcgcgcagccgttatgcgcaggccgtgcggctgacgatgaac
ggcaacgccgacgcggccgcgctgcgccgcgtgctcgagccgcacgtgtcgaaggacgat
cccgcggccacggctgcggtcgaggcgcctgcaccgcgcggcggcgggcgcgacggcggc
cgccgtccgcaggcgccgctgccgaacgggctcgcggtgcaggttcactacagcaacgcg
cgggcgcaaggcgaaatgcgcctcggcgacgcatggcgcgtgaagccgagcgacgtgctg
ctcgcggagctgcgtgcggcgttcgacggcagcgtcgtcgaaatcacgtactga
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integrated database retrieval system
