Burkholderia cepacia ATCC 25416: APZ15_19905
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Entry
APZ15_19905 CDS
T04772
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bcep
Burkholderia cepacia ATCC 25416
Pathway
bcep03030
DNA replication
bcep03410
Base excision repair
bcep03420
Nucleotide excision repair
bcep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
APZ15_19905
03410 Base excision repair
APZ15_19905
03420 Nucleotide excision repair
APZ15_19905
03440 Homologous recombination
APZ15_19905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcep03032
]
APZ15_19905
03400 DNA repair and recombination proteins [BR:
bcep03400
]
APZ15_19905
Enzymes [BR:
bcep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
APZ15_19905
DNA replication proteins [BR:
bcep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
APZ15_19905
DNA repair and recombination proteins [BR:
bcep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
APZ15_19905
NER (nucleotide excision repair)
GGR (global genome repair) factors
APZ15_19905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
ALK20135
LinkDB
All DBs
Position
2:complement(561830..564583)
Genome browser
AA seq
917 aa
AA seq
DB search
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIINMLRRMRKEVSAEY
SACVFDAKGKTFRDDLYADYKANRPSMPPDLALQVEPIHGAVRALGWPLLMVEGVEADDV
IGTLAREAERHGMNVIVSTGDKDLAQLVTDRVTLVNTMTNETLDRDGVIAKFGVPPERII
DYLALIGDTVDNVPGVEKCGPKTAVKWLAQYDSLDGVIEHAGDIKGVVGDNLRRALDFLP
LGRKLVTVETACDLAPHLESIEASLKTDGEARDMMRDIFARYGFKTWLREVDSAPAEGGG
ADAPEGEPAPVVAADIVREYDTIQTWEQFDAWFAKIDTAALTAFDTETTSLDPMLARLVG
LSFSIEPGKAAYLPVAHRGPDMPEQLPLDEVLARLKPWLESADRKKVGQHLKYDAQVLAN
YDIELNGIEHDTLLESYVVESHRTHDMDSLALRHLGVKTIKYEDVAGKGAKQIGFDEVAL
AEAAAYAAEDADITLQLHHVLYPQVAREPGLERVYREIEMPVSLVLRKMERTGVLIDDAR
LQAQSTEIATRLIELEGQAYELAGGEFNLGSPKQIGQIFFEKLQLPVVKKTPSGAPSTDE
EVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPSTGRVHTNYAQAVAVTGRLAS
NDPNLQNIPVRTAEGRRIREAFIASPGHRIVSADYSQIELRIMAHISGDASLLRAFSQGE
DIHRATAAEVFGVTPLEVNSDQRRIAKVINFGLIYGMSAFGLASNLGITRDAAKLYIDRY
FARYPGVAQYMEDTRSVAKEKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGT
AADLIKLSMIAVDDWLTRDKLASRMIMQVHDELVLEVPDGELSLVREKLPEMMCGVAKLK
VPLVAEVGAGANWEEAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgacggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatttgcgtggccctggcggggagccgaccgga
gcgctctacggaatcatcaacatgctgcgccgtatgcgcaaggaagtcagtgcagagtat
agcgcttgcgtgttcgatgcaaagggcaagacgttccgtgacgacctttatgccgactat
aaggcaaaccgcccgtcgatgccgcccgatcttgcgttgcaggtcgagccgatccacggc
gccgtgcgtgcgctcggctggccgctgctgatggtcgaaggcgtcgaggccgacgacgtg
atcggcacgctcgcgcgcgaagccgagcggcacgggatgaacgtgatcgtgtcgacgggc
gacaaggatctcgcacagctcgtgaccgaccgcgtcacgctcgtcaacacgatgaccaac
gagacgctcgatcgcgacggcgtgatcgcgaagttcggcgtgccgcccgagcggatcatc
gattacctcgcgttgatcggcgacaccgtcgacaacgtgccgggcgtcgagaagtgcggg
ccgaagacggccgtgaaatggctggcccaatacgacagcctcgacggcgtgatcgagcat
gcgggcgacatcaagggcgtggtcggcgacaacctgcgccgcgcgctcgacttcctgccg
ctcggccgcaagctcgtgaccgtcgagacggcctgcgatctcgcgccgcacctcgaatcg
atcgaggcgtcgttgaagacggacggcgaagcccgcgacatgatgcgcgacatcttcgcg
cgttacggcttcaagacctggctgcgcgaagtcgacagcgcgccggccgaaggcggcggc
gccgatgcgccggaaggcgagccggcgccggtggtggcagccgacatcgtccgcgaatac
gacacgatccagacctgggagcagttcgacgcgtggttcgccaagatcgacacggccgcg
ctgaccgcgttcgacaccgagacgacttcgctcgacccgatgctcgcgcggctcgtcggc
ctgtcgttctcgatcgagccgggcaaggcggcatacctgccggttgcgcaccgcggcccc
gacatgcccgaacagcttccgctcgacgaagtgctcgcgcgcctgaagccgtggctcgaa
tcggccgatcgcaagaaggttggccagcacctgaaatacgacgcgcaggtgctcgcgaac
tacgacatcgaactgaacggcatcgagcacgacacgctgctcgaatcgtacgtcgtcgaa
tcgcaccgcacgcacgacatggacagcctcgcgctgcgtcatctgggcgtcaagacgatc
aagtacgaagacgtggccggcaagggcgcgaagcagatcggtttcgacgaagtggcgctt
gcggaggccgccgcatacgcggccgaagatgcggacatcacgctgcagctgcatcacgtg
ctgtatccgcaggttgcacgcgaaccgggcctcgagcgcgtgtatcgcgagatcgaaatg
cccgtgtcgctcgtgctgcgcaagatggaacgcacgggcgtcctgatcgacgatgcgcgc
ctgcaggcgcagagcaccgaaatcgcgacgcgcctgatcgagctcgaagggcaggcgtac
gaactggccggcggcgaattcaatctcggctcgccgaaacagatcgggcagattttcttc
gagaagctgcaactgccggtcgtgaaaaagacgccgagcggcgcgccgtcgaccgacgag
gaagtgctgcagaaactggccgaggactacccgctgccgaagctgctgctcgagcatcgc
gggctgtcgaagctgaagtcgacctataccgacaagctgccgcgcatggtgaacccgtcc
acgggccgcgtgcacacgaactacgcgcaggccgtcgcggtcacgggccgtcttgcgtcg
aacgaccccaatcttcagaacattccggtgcgcacggccgagggccggcggatccgcgag
gcgttcatcgcctcgccgggccaccggatcgtgtcggccgattattcgcagatcgaactg
cggatcatggcgcatatttcgggcgatgcgtcgctgctgcgcgcgttctcgcagggcgag
gacattcaccgtgcaacggccgccgaggtgttcggcgtgacgccgctggaggtcaattcc
gaccagcgccggatcgcgaaggtgatcaacttcgggctcatctacgggatgagcgcgttc
gggctcgcgtcgaacctcggcattacgcgtgatgcggcgaagctctatatcgaccggtat
ttcgcccgttatccgggcgtcgcgcagtacatggaagacacgcgctcggtggcgaaggag
aagggctacgtcgaaaccgttttcggtcgccgcctgtggctgcccgagatcaacggcggc
aacgggccgcgccgccaggcagccgagcgcgcggcgatcaatgcgccgatgcagggcacg
gcggccgacctgatcaagctgtcgatgatcgcggtggacgactggctcacgcgcgacaag
cttgcgtcgcggatgatcatgcaggtgcacgatgaactggtgctcgaggtacccgacggc
gagctgtcgctggtgcgcgagaaactgccggaaatgatgtgcggcgtggcgaagctcaag
gtgccgctcgtcgccgaagtgggtgccggcgcgaactgggaagaggcacactga
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