Burkholderia cepacia ATCC 25416: APZ15_25285
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Entry
APZ15_25285 CDS
T04772
Name
(GenBank) adenosine deaminase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bcep
Burkholderia cepacia ATCC 25416
Pathway
bcep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
APZ15_25285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcep03000
]
APZ15_25285
03400 DNA repair and recombination proteins [BR:
bcep03400
]
APZ15_25285
Enzymes [BR:
bcep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
APZ15_25285
Transcription factors [BR:
bcep03000
]
Prokaryotic type
Helix-turn-helix
AraC family
APZ15_25285
DNA repair and recombination proteins [BR:
bcep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
APZ15_25285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
RecR_HhH
HTH_23
HHH
Motif
Other DBs
NCBI-ProteinID:
ALK21099
LinkDB
All DBs
Position
2:complement(1781216..1782727)
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AA seq
503 aa
AA seq
DB search
MPTPIDTPDSDACYLALKAHDARFDGSFFAAVTSTGIYCRPVCRVKTPRRENLRFYRHAA
EAEAAGFRPCLRCRPELAPRAASWSTEDASRILALQAARLMDEPDAWRHMTSARPTFGQS
SGGLMPRIAQRLGVTDRHLRRIFDAHFGVSPLQYLQTRRLLAAKQLIADTRLPMSQVAAS
SGFSSVRRFNDAFSRHYGLNPSALRRARSASDGQGVTVRLGWRPPYDVQAMVGFLRLRAL
PGVEQVAGLEYTRTLRLVQGTQARSGWLRARLDEDRAQAVLTIGDSLAAALPALINRVRA
AFDLDADPIAIHAALHAAFPSGEGLRVPGTLDGFELAVRAVLGQQVTVAAARTLGARLVA
AFGDPIETPVAGLDRLFPTPAALAAATGDELGRLGITRQRQTALHALAHAVLDGRIALHP
GVDVAATCAELCALPGIGDWTAQYIAMRALRWPDAFPAGDVALQKALGVGSARAAAQAAE
QWRPWRGYSVLRAWHAMNHGALA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgcctacccccatcgacacccccgacagcgacgcctgctacctggcgctgaaggcgcac
gacgcgcgcttcgacggctcctttttcgcggccgtcaccagcaccggcatctactgtcgt
ccggtgtgtcgcgtgaagacaccgcgtcgcgagaacctccgcttctaccgtcacgcggca
gaggcagaagcggccggtttcaggccctgcttgcgttgccgccccgaattggccccgcgc
gcggcatcctggagcacggaggacgcttcgcgcatcctggccctgcaagccgcaaggttg
atggatgaacccgacgcatggcggcacatgacctccgcgcgcccgaccttcggacagtcg
agcggcggcttgatgccgcgcattgcgcagcggctgggagtgaccgaccgccatctgcgc
cgcattttcgacgcacactttggcgtgtcgccgcttcagtaccttcaaacacgccggctg
ttggcggccaagcagttgattgccgacacccgattgccgatgagccaggtcgcggcgtcc
agcggcttttccagcgtccgacgcttcaacgatgccttctcgcgccactacggcctgaat
cccagcgccttgcgccgggccagatccgcgtccgatggacaaggcgtgaccgtgcgactc
ggctggcggcctccctatgacgtacaggcaatggtgggctttttgcgcctgcgcgcgttg
cccggcgtcgagcaggtcgcgggcctggaatacacgcgaacgctgcggcttgtgcaaggg
acgcaggcgcgtagcggctggttgcgcgctcgcctcgacgaagatcgcgcgcaggccgtg
ctgacgatcggcgattcattggccgccgccctgccggcgctgatcaaccgtgtgcgcgcc
gcgttcgatctggacgccgacccgatcgccatccacgcggctctgcacgccgcgttcccg
tcgggcgaaggcttgcgcgtgccgggcacactggacggcttcgagctggcggtgcgcgcc
gtgctgggccagcaggtcaccgtggccgctgcacgcacactgggcgcgcgcctggttgcg
gccttcggcgatccgatcgaaacccctgtcgcgggtctggatcgtctctttcccacgcct
gctgccctggcggccgccaccggcgatgagctcggccgcctgggcatcacgcggcaacga
cagaccgcgctgcatgcgctggcgcacgcggtgctggacgggcgcatcgctttgcacccc
ggcgtagacgtcgctgcgacttgcgccgaattgtgcgcgctgcccggcatcggcgactgg
acggcgcagtacatcgccatgcgcgcgctgcgttggcccgacgcctttcccgccggcgac
gtcgcgttgcaaaaggccctgggtgtgggtagcgcccgtgccgcagcacaagccgccgag
caatggcggccctggcgcggctattcggtgctgcgtgcgtggcatgcgatgaatcacggt
gcgttggcctga
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