Bacillus cereus FRI-35: BCK_12290
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Entry
BCK_12290 CDS
T02291
Name
(GenBank) formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bcer
Bacillus cereus FRI-35
Pathway
bcer03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BCK_12290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcer03400
]
BCK_12290
Enzymes [BR:
bcer01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BCK_12290
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BCK_12290
DNA repair and recombination proteins [BR:
bcer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BCK_12290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AFQ10357
LinkDB
All DBs
Position
2452323..2453153
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AA seq
276 aa
AA seq
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MPELPEVENVRRTLENLVTGKTIEDVIVTYPKIVKRPDDAKIFKEMLKGETIENIKRRGK
FLLLYVTNYVIVSHLRMEGKFLLHQEDEPIDKHTHVRFLFTDGTELHYKDVRKFGTMHLF
KKGEEMNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLVGLGNIYVDEV
LFRSQIHPEREASSLTAEEIERIYEATVTTLGEAVKRGGSTIRTYINSQGQIGSFQELLN
VYGKKGEPCVTCGTILEKTVVGGRGTHYCPICQPRI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggttgaaaacgtcagacggacacttgaaaatcttgtaacagga
aaaacaattgaagatgtcattgttacctatcccaaaatagtaaaacgtccagatgatgca
aaaatctttaaagaaatgctaaaaggcgagacgattgaaaatataaagcgaagaggaaaa
tttttgcttttatatgtaacgaattatgtcattgtttcacatttgcgtatggaaggtaaa
tttttactgcatcaagaggatgagccaattgataagcatacgcacgtccgtttcttattt
acagatggaactgaattacattataaagatgtgagaaagttcggtacgatgcatctcttt
aagaaaggtgaggaaatgaatcaaatgcctcttgctgacttaggtccagagccatttgat
gctgaattgacaccacagtatttacaagagagattgcaaaagacaaatcgtaaaataaaa
gttgtattattagaccagcgtcttttagtaggacttggaaatatatatgtagatgaagtt
ttattccgttctcaaattcatccagaacgagaagcgtcgtctttaacagcagaagaaatt
gagcgaatttatgaggcgactgttacaacgttaggcgaagcagtgaagcgtggcggaagt
acaattcgaacgtatatcaactcacaagggcaaattggctcattccaagaacttctaaat
gtatatggaaaaaaaggagaaccgtgtgtgacttgcggtacgatattagaaaaaacagtt
gttggcggaagaggaacgcattactgcccgatttgtcagccaagaatatag
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