Bacillus cereus FRI-35: BCK_13565
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Entry
BCK_13565 CDS
T02291
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bcer
Bacillus cereus FRI-35
Pathway
bcer03030
DNA replication
bcer03430
Mismatch repair
bcer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BCK_13565 (holA)
03430 Mismatch repair
BCK_13565 (holA)
03440 Homologous recombination
BCK_13565 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcer03032
]
BCK_13565 (holA)
03400 DNA repair and recombination proteins [BR:
bcer03400
]
BCK_13565 (holA)
Enzymes [BR:
bcer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BCK_13565 (holA)
DNA replication proteins [BR:
bcer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BCK_13565 (holA)
DNA repair and recombination proteins [BR:
bcer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BCK_13565 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AFQ10611
LinkDB
All DBs
Position
2692339..2693349
Genome browser
AA seq
336 aa
AA seq
DB search
MSDIHKKIKKKQFAPLYLLYGTEAFFINETIKLITTEALEEEDREFNVVTYDLEEAYLED
VVEDARTLPFFGERKVLLIKSPLFLTSQKEKLEQNIKILEEYIGEPSPFSILVFVAPYEK
LDERKKITKLLKKTADVVEANAMQVQDVQKWIVARADEVHVHIDHAAVSLLLELVGSNVT
MLAKEMDKLTLYVGMGGDITPKLVAELVPKSVEQNVFALTEKVVKKDIAGAMQILDGLFT
QQEEPIKLLALLVSQFRLLHQVKELQQRGYGQNQIASHIGVHPYRVKLAMNQTKFFSFEE
LKKVIMELAEADYSMKTGKMDKKLVLEFFLMRLNHM
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatatacataaaaagattaaaaagaagcagtttgctccgttatatttactatat
ggaacagaagcgttttttataaatgaaacgataaagcttattacaacagaagcgcttgaa
gaggaagatcgcgagtttaatgttgtgacatatgatttagaagaagcatatttagaggat
gtggttgaggatgcacgtacacttccttttttcggagaacgtaaagtgttattaataaaa
tcaccactctttttaacttcacaaaaagaaaagttagaacaaaatataaaaattttagaa
gaatatattggggaaccttctcccttttctattcttgtttttgttgcgccttacgaaaag
ctggatgaacgaaaaaaaattacaaaactattaaagaaaacagcggatgtagtagaagcg
aatgcaatgcaagtgcaggatgttcagaagtggattgttgctcgggcagatgaagtgcat
gtgcatattgatcatgcggctgttagtttgttgttagagcttgtgggaagtaatgtaacg
atgttggcgaaggaaatggacaagttaacgttatatgtcggtatgggcggagatattaca
ccgaaactcgttgcagagcttgtgccaaaatcagttgaacaaaatgtgtttgctttgaca
gaaaaagtggtaaaaaaagatatcgcgggtgcgatgcaaattttggatggattatttacg
cagcaggaggaacctattaaattgcttgcgttattagtaagtcaattccgtttactgcat
caagtgaaagagttacagcagcgtggttacggtcaaaatcaaatcgcgtctcatattggt
gtgcatccatatcgtgtaaaattagcgatgaatcaaacgaagtttttctcttttgaagaa
ttaaaaaaagtgataatggaattagcggaagctgattatagtatgaaaacgggaaaaatg
gataagaaacttgtgctcgagtttttcttaatgcggttaaatcatatgtga
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