Bacillus cereus FRI-35: BCK_15345
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Entry
BCK_15345 CDS
T02291
Name
(GenBank) Hydrolase, metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bcer
Bacillus cereus FRI-35
Pathway
bcer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCK_15345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcer03019
]
BCK_15345
Messenger RNA biogenesis [BR:
bcer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BCK_15345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
DUF4453
Motif
Other DBs
NCBI-ProteinID:
AFQ10967
LinkDB
All DBs
Position
complement(3005161..3006828)
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AA seq
555 aa
AA seq
DB search
MKFLKNDQAAVFALGGLGEIGKNTYAVQFQDEIIIIDAGIKFPEDELLGIDYVIPDYTYF
VRNEDKIKGLFITHGHEDHIGGIPYLLRQVNIPIYGGKLAIALIKNKLEEHGLLRKAKLY
EIQEDDVIKFKKTSVSFFRTTHSIPDSYGVVVKTPQGQVVHTGDFKFDFTPVGEPADLTK
MAEIGKDGVLCLLSDSTNSEVPNFTMSERRVGDSIQDIFRKVEGRIIFATFASNIHRLQQ
VVEAAVENNRKVAVFGRSMEAAIEIGQNLGYIRCPKDTFIDASQLNRLPANKVVILCTGS
QGEPMAALSRIANGTHRQIQIIPGDTVVFSSSPIPGNTVSVSRTINMLYRAGADVIHGKL
SNIHTSGHGGQEEQKLMLRLIKPKYFMPIHGEYRMQRMHMKLANDCGIPEENCFIMDNGD
VLALRSDEASVAGKIPSGSVYIDGNGIGDIGNIVLRDRRILSEEGLVIVVVSIDMKEFKV
AAGPDIISRGFVYMRESSDLINDAQTLITTHLEKVMERKTTQWSEIKNEITDTLAPFLYE
KTKRRPMILPIIMEI
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttctaaagaatgatcaagcagccgtttttgctttaggtggtcttggtgaaatc
ggtaaaaatacatatgctgttcaatttcaagatgaaattattataattgacgctggaatt
aagtttccagaagacgaactcctcggaatcgattatgtaataccagattacacttatttt
gtgcgaaacgaagataaaattaaagggttattcattacacatggtcacgaagatcatatc
ggtggaattccttacttattacgtcaagtgaacattccgatttatggcggaaaattagca
attgcactaatcaaaaacaaattagaagagcacggattacttcgtaaagcaaagctttat
gaaattcaagaagatgatgttattaaatttaaaaagacatctgtttccttcttccgtaca
actcacagtatcccagattcatacggagttgttgtgaaaacacctcaaggacaagtggtt
catactggagatttcaaatttgacttcacaccggttggtgaaccagcggacttaacaaaa
atggctgaaatcggaaaagacggtgtactttgtctcttatctgacagtacaaacagtgaa
gttccaaactttacaatgtctgagcgccgtgttggtgatagtattcaagatattttccgc
aaagtagaaggtcgtattatcttcgcaacctttgcatcaaatatccatcgcttgcaacaa
gtcgttgaagcggctgttgaaaacaatcgtaaagtggctgtatttggccgaagtatggag
gcagcgattgaaatcggacaaaacctcggttatattcgctgtccgaaagatacattcata
gatgcatctcaattaaatcgtctaccggctaataaagttgttattttatgtacaggtagt
caaggggagccaatggcagcactttcacgtattgctaatggtacccatcgtcaaattcaa
attattcctggcgacacagttgtgttctcttcttcaccaatccctggtaatacagttagt
gtaagccgtacaattaatatgttgtaccgtgctggtgctgatgtaatccacggaaaactg
tcaaacattcatacgagtggacacggtggacaagaagaacaaaaactaatgcttcgtcta
attaaaccgaagtatttcatgccaattcatggtgaatatcgtatgcaacgtatgcatatg
aaattagcaaatgattgtggtattccagaagaaaactgtttcattatggataatggtgat
gttcttgccttacgttcagatgaagcaagtgtagctggtaaaataccatctggatctgtt
tatattgacggaaatggtattggagatatcggtaatatcgtattacgcgatcgtcgtatc
ctttctgaagaaggacttgttattgtcgtcgtaagcattgatatgaaagaatttaaagtt
gcagcagggcctgatattatctcacgtggtttcgtttatatgcgcgaaagtagtgattta
attaatgatgctcaaacattaattacaactcatttagaaaaagtaatggaacgtaaaaca
acgcaatggtctgaaattaaaaatgaaattacagatacattagcaccattcctatatgag
aaaacgaaacgtcgcccaatgattttaccaatcattatggagatataa
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