Bacillus cereus FRI-35: BCK_16160
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Entry
BCK_16160 CDS
T02291
Symbol
polC
Name
(GenBank) DNA polymerase III PolC
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
bcer
Bacillus cereus FRI-35
Pathway
bcer03030
DNA replication
bcer03430
Mismatch repair
bcer03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BCK_16160 (polC)
03430 Mismatch repair
BCK_16160 (polC)
03440 Homologous recombination
BCK_16160 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcer03032
]
BCK_16160 (polC)
03400 DNA repair and recombination proteins [BR:
bcer03400
]
BCK_16160 (polC)
Enzymes [BR:
bcer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BCK_16160 (polC)
DNA replication proteins [BR:
bcer03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BCK_16160 (polC)
DNA repair and recombination proteins [BR:
bcer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BCK_16160 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
DEDDh_C
RNase_H_2
DUF1409
Motif
Other DBs
NCBI-ProteinID:
AFQ11130
LinkDB
All DBs
Position
3165379..3169680
Genome browser
AA seq
1433 aa
AA seq
DB search
MSLTNEQQERFQILLQQLQIPEDLINQYLQGGGIEKLVIDKANKSWHFDLQVPRILPTEL
YELLETKLKQSFSHIARTTFALETENKQFTEEEVRAYWPLCTERITFSPMFAYLKKQLPQ
VNGVKLLINVNNELESTALKKNVAKPVGDQYEAFGFPRFQLDTHIQQNTEEMQKFREQTQ
QEDRERVIQAMEEMAKKQAEESSVVHEGPITLGYLIKPDEEITPMREIQDEERRKTVQGY
VFHVETKELRSGRTLLTLKITDYTDSIMIKMFSRDKEDIPMLQSLKKGMWVKARGSVQND
TFVRDLVMIANDINEITGPSRKDKAPEGEKRVELHLHTPMSQMDAVTPVSKLVAQAGKWG
HEAIAITDHAVAQSFPEAYSAGKKAGIKVIYGVEANLVNDGVPIAYNEAHRLLAEETYVV
FDVETTGLSAVYDTVIELAAVKVKGGEIIDRFESFANPHQPLSATIIELTGITDDMLTDA
PEVDEVFKKFEEWMGDHTLVAHNASFDMGFINVGFKKAGLEKTKNPVIDTLELARFLFPE
MKNHRLNTLCKKMDIELTQHHRAIYDTEATGYLLVKMLKEVIEKGFEYHDQLNDSMGQGD
AYKRGRPSHMTLLATSDVGLKNLYKLVSYSHLNYFYRVPRVPRSLLKKYREGILVGTACD
KGEVFEAMMQKAPEEVEEIAQFYDYIEVMPPEVLRHLVERELVRDEGQLKTIISNLVKLG
ETLDKPVVATGNVHYLNPEDAMYRKILVSSQGGANPLNRHSLPPVHFRTTDEMLECFSFL
GEDVAKEIVVTNTQKIASLIGDVHPVKDDLYTPKIEGADDETRDMSYKMARSIYGEELPE
IVEARLEKELKSIIGHGFAVIYLISHKLVKKSLVDGYLVGSRGSVGSSFVATMMEITEVN
PLPPHYVCPKCKQSEFFNDGSVGSGFDLPDKECPTCNVPYVKDGHDIPFETFLGFKGDKV
PDIDLNFSGEYQPRAHNYTKVLFGEDYVYRAGTIGTVAEKTAYGYVKGYANDHNLTIRNA
EIDRLVAGCTGVKRTTGQHPGGIIVVPDYMDIFDFSPIQYPADSIGAEWRTTHFDFHSIH
DNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFSGPESLGVTEEQINCKTG
TLGIPEFGTKFVRQMLEETKPTTFSELVQISGLSHGTDVWLGNANELIYNGTCTLSEVIG
CRDDIMVYLIYQGLDPSLAFKIMESVRKGKGVPEEWEEDMKNNNVPGWYIDSCKKIKYMF
PKAHAAAYVLMAVRIAYFKVHFALLFYAAYFTVRADDFDVEAMAKGSASIRARIDEIAQK
GLDASPKEKSLLTVLEMTLEMCERGYSFQKVDLYRSHATDFIIDGDSLIPPFNAVPGLGT
NAALSIVEARKNGEFLSKEDLQQRSKVSKTIIEYLDSQGCLGDLPDQNQLSLF
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaacaaatgaacaacaagagcgatttcaaattttgctccagcagttgcaaata
ccagaagaccttataaatcaatatttacaaggcggtggcattgaaaagctagttattgat
aaagcgaataaaagttggcattttgatttacaagtaccgcgtattttgcctacagaatta
tatgaattgctagaaacaaagcttaagcaatcattttctcatattgcaagaacaacattt
gcattagaaacagagaacaaacaatttactgaagaagaagtgagggcgtattggccactt
tgtacagaacgaattacattttcacctatgtttgcttatttaaagaagcagcttccgcag
gtcaatggagtgaagttacttataaatgtgaataatgagctggaatctactgctttaaag
aaaaacgttgcgaaaccagtaggggatcaatacgaggcttttggattcccgcgtttccag
ttagacacacatatacagcaaaatacagaagaaatgcaaaagtttcgtgagcaaacgcag
caagaagaccgcgagcgtgttatacaagctatggaagaaatggcgaagaagcaagctgaa
gaaagcagcgttgtgcatgaagggccgatcacactcgggtatcttattaagccagatgaa
gagattacaccaatgcgagaaattcaagatgaagaaagaagaaaaacagttcaaggatat
gtcttccatgtggaaacgaaagagcttcgtagtggacgtacgttattaactttaaaaata
acggattatacagattcgattatgatcaaaatgttctcacgtgataaagaagatattcca
atgctacaatccttgaaaaaaggaatgtgggtgaaggctcgtggttctgttcaaaatgat
acatttgttcgagatttagtaatgattgcaaatgatattaatgaaataacaggaccgtct
cgtaaagataaagccccagaaggcgaaaaacgagtagagctccatcttcacacgccaatg
agtcaaatggatgctgttactccagtttctaagcttgttgctcaagcaggtaaatggggg
catgaggctattgccattacagaccatgctgttgcacagtcattcccagaagcatattca
gctgggaaaaaagccggaattaaagttatatatggtgtggaagcaaacttagtgaatgac
ggtgtaccaatagcgtataacgaagcgcatcgtttacttgcagaggaaacgtatgttgtt
ttcgacgttgagacgacaggtttatcagctgtatatgatacagttattgagttagctgct
gtaaaagtaaaaggcggcgaaattattgaccgctttgaatcttttgcaaatccgcatcaa
ccattatcggcaacgatcattgaattaacaggtattacagatgatatgttaaccgacgca
ccagaagtggacgaagtgtttaaaaagtttgaggaatggatgggtgaccatacacttgtt
gctcataacgcaagcttcgatatgggctttattaacgtaggatttaaaaaagctggttta
gaaaaaacaaaaaatccagtaatagatacgttagagcttgcacgattcttattcccagaa
atgaaaaatcaccgtttaaatacgttgtgtaaaaagatggatatcgaattaacgcaacat
caccgtgcaatttatgatacagaagcaacgggatatttacttgtaaaaatgttaaaagag
gtaattgaaaaaggttttgaatatcacgatcaattaaacgatagtatgggacaaggggat
gcatataaacgcgggcgtccaagtcatatgacattacttgctacatcggatgttggattg
aaaaatttatataaacttgtttcatattctcatttaaattacttttaccgtgtaccacga
gtaccaagatcactattaaaaaagtatcgtgaaggtattttagtaggaacggcttgtgat
aaaggtgaagtgtttgaggcgatgatgcaaaaagctcctgaagaggtagaagaaattgcg
cagttctacgattacattgaagtaatgccaccagaagtgttacgtcatttagtagagcgt
gaactcgttcgagatgagggacaattaaaaacaatcatttctaacttagtaaaactaggt
gagactttagataaaccagttgtggctacaggaaacgtgcattacttaaatccagaagat
gcaatgtatcgtaaaattttagtaagttcacagggtggagcgaatccgttaaaccgacat
tcattaccacctgtacatttccgtacaacggatgaaatgttagagtgtttctcattttta
ggtgaagacgtagcgaaagaaattgtcgtaacgaatacacaaaagattgcatcattaatt
ggtgatgttcatccagtaaaagatgatctatatacaccgaaaattgaaggtgcagatgat
gaaacgcgtgatatgagttataaaatggcgcgtagcatttatggtgaagagttacctgaa
atagtagaagcccgtttagaaaaagaattaaaaagtattattggtcatggattcgccgta
atctatttaatttcacataaacttgtgaaaaaatcattagtagacggatatctagtaggt
tcgcgtggatcggtaggttcatcattcgttgcaacgatgatggaaattacagaagtaaac
ccattaccaccacattatgtatgtccgaagtgtaagcaatcagaattctttaatgatggt
tctgtagggtctggtttcgacttaccggataaagaatgtcctacatgtaatgttccatac
gtaaaagatggacatgatattccgttcgaaacgttccttggatttaaaggagataaggta
cccgatatcgatttgaatttctccggggaataccaaccacgtgcccataactatacgaaa
gtactgttcggtgaagattatgtatatcgtgcaggaacgattggtacagttgcggaaaaa
actgcttatggatatgtaaaaggttatgcaaatgatcataacttaacgattcgaaatgca
gaaattgatcgcttagtagcaggatgtaccggtgtaaaacgtacaacaggacagcatcca
ggtggtattatcgttgtgccagattacatggacatttttgatttctcaccgatacagtat
ccggcagattcaataggggctgagtggagaacgacacactttgacttccactcgattcat
gataatttattgaaacttgatatactaggacacgatgatccgacagttattcgtatgtta
caagatttaagtggtattgatccgaaaacaatcccaacggacgatccagaagtaatgaaa
attttctcagggccagaatcgttaggcgtaacggaagaacaaattaactgtaaaacaggt
acacttggtataccagagtttggtacgaaattcgtaagacagatgttagaagagacgaaa
ccgacgacattctcagagttagtccaaatttctggattatcacatggtacggacgtatgg
ctaggtaatgcaaacgaattaatttataacggtacatgtacgctgagtgaagttatcggt
tgtcgtgatgacatcatggtatatttaatctatcaaggtttagacccatcattagccttc
aaaatcatggagtcagtacgtaaaggtaaaggtgtaccagaagaatgggaagaggacatg
aaaaataataatgtaccaggttggtatattgattcatgtaagaagattaagtacatgttc
cctaaagcccatgcggctgcatacgtacttatggccgtgcgtattgcatactttaaagta
catttcgcgcttctattctatgcggcatactttacggttcgtgcagatgactttgacgta
gaagcgatggcgaaaggttcagcatctatacgtgcaagaattgatgaaattgcgcaaaaa
ggtttagatgcatcgccgaaagagaagagtttattaacggtactagaaatgacacttgaa
atgtgtgagcgtggatactcattccaaaaggttgatttgtatcgttcacatgcaacagac
tttattattgatggagactcattaattcctccatttaatgcggtacctggtcttggtacg
aacgcagctttaagtattgtggaagctcgtaaaaatggagaattcttatcaaaggaagac
ttgcagcagcgtagtaaggtttcgaaaacaattattgagtacttagatagtcaaggttgt
ttaggtgatttgccggatcaaaaccagttatcactgttctaa
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integrated database retrieval system
