Bacillus cereus FRI-35: BCK_16215
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Entry
BCK_16215 CDS
T02291
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bcer
Bacillus cereus FRI-35
Pathway
bcer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCK_16215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcer03019
]
BCK_16215
03016 Transfer RNA biogenesis [BR:
bcer03016
]
BCK_16215
Enzymes [BR:
bcer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BCK_16215
Messenger RNA biogenesis [BR:
bcer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BCK_16215
Transfer RNA biogenesis [BR:
bcer03016
]
Prokaryotic type
tRNA degradation factors
BCK_16215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
SPATA25
S1_RRP5
PCB_OB
KorB
Motif
Other DBs
NCBI-ProteinID:
AFQ11141
LinkDB
All DBs
Position
3177474..3179612
Genome browser
AA seq
712 aa
AA seq
DB search
MSQEKQVFSIDLAGRQLTVETGQLAKQANGAVLVRYGDTAVLSTATASKEAKNVDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFADGFRNEVQVVSIVMSV
DQDCSSEMAAMLGSSLALSISDIPFEGPIAGATVGRINGEFVINPTVEQQEQSDIHLVVA
GTKDAINMVEAGADQVPEETMLEAIMFGHDEIKRLIAFQEEIVQAVGKEKSEVKLYEVDA
DLNQSVREMAEKDMHSAIQVHEKHAREDAINEVKKRVIEHYEAQEADADTLGQVNEILYK
IVKEEVRRLITVEKIRPDGRKGDEIRPLASEVGILSRTHGSGLFTRGQTQALSICTLGAL
GDVQILDGLGVEESKRFMHHYNFPSFSVGETRPMRGPGRREIGHGALGERALEPVIPSEK
DFPYTVRLVSEVLESNGSTSQASICGSTLAMMDAGVPLKAPVAGIAMGLVKSGEHYTILT
DIQGMEDHLGDMDFKVAGTAHGVTALQMDIKIDGLSREILEEALQQAKVGRMHILDHMLS
VIAEPRTELSAYAPKIITMTINPDKIRDVIGPSGKQINKIIEETGVKIDIEQDGTVFISS
INQEMNDKAKKIIEDIVREVQVGEIYEGKVKRVEKFGAFVELFSGKDGLVHISELALERV
GKVEDVVKIGDVITVKVIEIDKQGRVNLSRKVLLKEEQEKEAAKEENKQEQQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagaaaagcaagtcttctcgatagatttagctggtcgccagctaacagttgaa
acaggtcagcttgcaaagcaagcgaacggagcagtattagtaagatatggcgatacagcg
gttctatctacagcaactgcatcaaaagaagcaaaaaatgtagatttcttcccacttaca
gtaaactatgaagagcgtttatatgcagtcggaaaaattcctggcggtttcattaaacgt
gaaggtcgtccaagtgaaaaagcaattttggcaagtcgtttaatcgaccgtccaattcgt
ccacttttcgcagatggtttccgtaacgaagtacaagttgtcagcatcgtaatgagtgtt
gatcaagattgttcttctgaaatggcagctatgcttggttcttcattagcgttatcgatt
tcagacattccatttgaaggtccgatcgcgggtgcaacagttggtcgtattaacggcgaa
ttcgttatcaacccaacagtagaacagcaagaacaaagtgatattcaccttgttgtagct
ggtacgaaagatgcaattaacatggttgaagcaggagcagatcaagtgcctgaggaaaca
atgttagaagcaattatgtttggtcatgacgaaattaaacgtctaattgcattccaagaa
gagattgtacaagctgtaggtaaagagaaatcagaagtgaaactttatgaagttgacgct
gatcttaaccaatctgtacgtgaaatggctgagaaggatatgcattctgcaattcaagta
catgagaaacatgcacgtgaagatgcaattaacgaagtgaaaaagcgtgtaattgagcat
tacgaagcgcaagaagctgatgctgatacattaggacaagtaaatgagattttatataaa
attgtaaaagaagaagtacgtcgtcttattacagttgagaaaatccgcccagatggccgt
aaaggtgacgaaatccgtccattagcatcagaggttggcattttatctcgtacacacggt
tctggtttattcacacgtggacaaacacaagcattaagtatttgtacattaggcgcatta
ggcgatgtgcaaattttagatggccttggtgtagaagaatcaaaacgctttatgcaccat
tacaatttcccatcatttagtgttggtgaaacaagaccaatgcgtggaccaggtcgtcgt
gaaattggtcacggtgcactaggagaacgtgctcttgagcctgtaattccgtctgaaaaa
gatttcccatacacagtccgtcttgtatctgaagtattagaatcaaatggttctacttca
caagcgagtatttgtggtagtactttagcaatgatggatgctggtgttccacttaaagct
ccagttgcaggtattgcaatgggcctagttaaatcaggtgagcattacacaattttaact
gatattcaaggtatggaagatcatttaggtgatatggactttaaagtagcaggtacagca
cacggtgtaactgcactacaaatggacattaaaatcgatggtctatctcgtgaaatttta
gaagaggcattacaacaagcgaaagttggtcgtatgcacattctagatcatatgttatct
gtaattgcagagccacgcactgaattatcagcgtacgctccaaagattattacaatgaca
attaacccagataaaatccgtgacgttatcggaccaagcggtaaacaaatcaataaaatt
attgaagaaactggcgttaaaattgacatcgagcaagatggtacagtattcatttcttca
ataaatcaagaaatgaacgacaaagctaagaaaattatcgaggatatcgttcgcgaagta
caagtaggggaaatctacgaaggaaaagtgaaacgtgttgagaaattcggtgctttcgtt
gaattattcagcggtaaagatggattagttcacatttctgaacttgcacttgagcgtgta
ggtaaagtagaagacgttgtgaaaatcggtgatgtaattacagttaaagttatcgagatt
gacaagcaaggtcgcgtgaatttatctagaaaagtattgctaaaagaagagcaagaaaaa
gaagctgctaaagaagaaaacaaacaagagcagcaataa
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