Bacillus cereus FRI-35: BCK_16350
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Entry
BCK_16350 CDS
T02291
Name
(GenBank) phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bcer
Bacillus cereus FRI-35
Pathway
bcer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCK_16350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcer03019
]
BCK_16350
Messenger RNA biogenesis [BR:
bcer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BCK_16350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF4407
DUF2844
Golgin_A5
Motif
Other DBs
NCBI-ProteinID:
AFQ11168
LinkDB
All DBs
Position
3208925..3210487
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AA seq
520 aa
AA seq
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MSSTVWILISILLATVGAVVGFFVRKSIAEAKINGAANEAKRILDEANREAEALKKEALL
EAKDEIHTLRTEAELEIRDRRSELQKQENRLMQKEENLDRKDETLDKREQQLEKKEDSLV
ARQQQIEELESKVGELVQKQQTELERISNLTREQAKAIILGKVESEVSHEIAVMVKESEV
RAKEEADKKAKEILSLAMQRCAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLT
GIDLIIDDTPEAVILSGFDPIRRETARIALDKLVQDGRIHPARIEEMVEKSRREVDEYIR
EVGEQTTFEVGVHGLHPDLIKILGRLKYRTSYGQNVLKHSMEVAYLTGLMAAELGEDEKL
ARRAGLLHDIGKAIDHEVEGSHVEIGVELATKYKEHPVVINSIASHHGDTEPTSIIAVLV
AAADALSAARPGARSETLENYIRRLEKLEEISESYEGVEKSFAIQAGREVRILVKPDTID
DLEAHRLARDIRKRIENELDYPGHIKVTVIRETRAVEYAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtacagtttggatactcatctccattttgcttgcaacagtcggtgcagttgtt
ggcttttttgttcgaaagtctattgctgaagcgaagattaatggtgcagccaatgaagcg
aaacgtattctagacgaagcgaatcgtgaggctgaagcacttaagaaagaagcgctttta
gaagcaaaggatgaaattcatacacttcgtacagaagctgaattagaaattcgtgaccgt
agaagcgaattacaaaaacaagaaaatcgtttaatgcaaaaagaagagaaccttgatcgt
aaagacgaaacgctcgataaacgcgagcaacagttagaaaagaaagaggattctcttgta
gcgagacaacaacagattgaagagttggaaagcaaagtgggagagttagttcaaaagcaa
caaacagaattagagcgcatttccaatctgacacgcgaacaagcgaaagcaattattctt
ggtaaagtagaaagtgaagtttctcatgaaattgccgtaatggtaaaagaaagtgaagtt
cgtgcgaaagaagaagcagataagaaagcaaaagagattttatctcttgcaatgcagaga
tgtgcagctgatcatgttgctgaaacaaccgtttcggttgtaaatcttccaaatgacgaa
atgaagggacgtattatcgggcgtgaaggtcgaaatattcgtacgttagaaacgttaaca
ggtattgacctaattatcgatgatacaccagaagcggttatcctttctggattcgatcca
attcgtcgtgaaacagctcgtatcgctcttgataaactagtacaggacggacgtattcac
ccagcgcgtattgaagagatggtcgaaaaatcaagacgtgaagtggacgagtatattcgc
gaagtcggagagcaaacaacgtttgaagtgggtgttcacggattacatccagatttaatt
aagattttaggtcgtttaaaataccgtacaagttacggacaaaacgtcttaaaacattct
atggaagttgcatatttaactggacttatggcggcagagcttggtgaggatgaaaaacta
gcaagacgtgctggtctattacatgatatcggtaaagcgattgaccatgaagtagaaggt
agccacgttgaaattggtgttgaacttgcaacgaaatataaagagcatcctgtagttata
aacagtattgcatctcaccacggagacacagaaccaacttctatcattgcagttttagtt
gcagcagcagatgcattatcagctgcaagacctggagctcgtagtgaaacacttgagaac
tatattcgtcgtcttgaaaagttagaagagatttcagagtcttatgaaggcgtagaaaaa
tctttcgcaattcaagcaggacgagaagttcgtattctggtaaaaccagatacaattgat
gatttagaagctcatcgtttagctcgtgatattcgaaaacgtattgaaaatgaactggat
tacccagggcatattaaagtaactgttattcgtgaaacacgtgcagtggaatacgcaaaa
taa
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