Brucella ceti TE10759-12: V910_101070
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Entry
V910_101070 CDS
T02934
Name
(GenBank) ribonuclease Rne/Rng domain-containing protein
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
bcet
Brucella ceti TE10759-12
Pathway
bcet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V910_101070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcet03019
]
V910_101070
03009 Ribosome biogenesis [BR:
bcet03009
]
V910_101070
Enzymes [BR:
bcet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
V910_101070
Messenger RNA biogenesis [BR:
bcet03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
V910_101070
Ribosome biogenesis [BR:
bcet03009
]
Prokaryotic type
rRNA processing factors
V910_101070
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
RhlB
Ogr_Delta
Motif
Other DBs
NCBI-ProteinID:
AHA99551
LinkDB
All DBs
Position
1:1100615..1103383
Genome browser
AA seq
922 aa
AA seq
DB search
MSNKMLIDASHPEETRVIVTRGNKIEEFDFESEHKKQLKGNIYLARVTRVEPSLQAAFVE
YGGNRHGFLAFSEIHPDYYQIPVADRLALLEAEAKAARAEDDEDEPRAKSDRSERNDRAR
RNRRRGGRRDGQNGEAQANGADKDLPAAEPVGPGFADYVAGTPAAALTQKGDIISEALDN
GDDDDVENEEDMVESVGSEDALEELPTHTRTHRRQYNIQEVIKRRQILLVQVVKEERGNK
GAALTTYLSLAGRYSVLMPNTARGGGISRKITNPQDRKRLKEIVKELEVPQGMGVILRTA
GANRTKAEVKRDYEYLMRLWENVRTLTLQSTAPALVYEEGSLIKRSIRDLYNKDITEILV
SGENGYREAKDFMRMLMPSHAKVVQPYRDHIPIFTRNGVEAQLDRMLVPQVTLKSGGYLI
INQTEALVAIDVNSGRSTREHSIEDTALQTNLEAAEEVARQLRLRDLAGLIVVDFIDMEE
KRNNRAVEKKMKECLKDDRARIQVGRISHFGLLEMSRQRIRASVLESTMQVCPHCGGTGH
IRSDSSMALHIIRGIEDYLLRHSGFDIHVRTPAASALYVLNHKRQILADLEGRFGVEISI
DADESVGNQHFVIDKGAPSTRPVTPSAVQPMVYEDDIEDPEIPVEEDETEEEARTDVQAG
EERSEENDRKRRRRRRRRGGRERDGRDLSAQEEAVSEEASEEDNETDQANEAVSSASMSE
EDRRKKRRRGRRGGRKNRREDDNRARRIPDPEFVGYTPVLPVKAEESIGEVVETVETVEA
PVVEAAPEEKPEKPARKPRARKTAKTEEAAEAVITAEAEEKPEKPARKTRTRKKAVDEAP
ADEAAAPAEEVVPEKPKRRTRKAAAKPVVEAEDVAEVKETVAAETQVETIAEPKSTEPVV
TSSESEDRKPKRSGWWQKKGFF
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaaaatgcttatagatgcctcccacccggaggagacccgcgttatcgtcacg
cgcggcaacaagattgaagaattcgatttcgaatcggaacataagaaacagctgaaaggc
aatatctacctcgcacgcgtcacccgtgtcgaaccgtcgcttcaggctgcattcgtggaa
tatggcggcaatcgccatggcttcctggcattttccgaaattcatcccgactattaccag
attccggtcgccgaccgccttgccctgcttgaagcggaagccaaggccgcacgcgctgaa
gacgacgaggacgaaccgcgcgccaaaagcgaccgcagtgaacgcaacgaccgcgcgcgc
cgcaatcgccgccgtggcggccgccgcgatggccagaatggcgaagcgcaggcaaacggt
gctgacaaggacctgccggcggcagagccggtcggtccgggctttgcggattacgttgcg
ggaacgcccgccgctgctctcacgcagaaaggcgatataatttccgaagccctcgacaat
ggcgatgacgatgatgtcgagaacgaagaggacatggtcgaatcggtcggctcggaagat
gctctggaagagcttccgacccacacccgcacccatcgccgccagtataatattcaggaa
gtcatcaagcgccgccagattcttctggtgcaggtggtcaaggaagagcgcggcaacaag
ggcgctgctctcaccacctatctttcgcttgccggacgttattcggtactgatgcccaac
accgcgcgcggtggcggcatttcgcgcaagatcaccaatccgcaggaccgcaagcgcctg
aaagagatcgtgaaggaactcgaagtgccgcagggcatgggtgtgatcctgcgcacggca
ggcgcaaaccgcaccaaggcggaagtcaagcgcgactatgaatatctgatgcgcctgtgg
gaaaacgtgcgcacgctgacgctgcaatcgacagcgcccgcgctcgtctatgaagaaggc
agcctcatcaagcgctctatccgtgatctttacaacaaggacatcacggaaatactcgtt
tccggcgagaacggctatcgcgaggccaaggatttcatgcgtatgctcatgccgagccat
gcgaaggtcgtccagccttaccgcgatcatattccgatcttcacgcgcaacggcgtggaa
gcgcagcttgaccgtatgcttgtgccgcaggtgacgctcaaatcgggcggctacctcatc
atcaaccagacggaagccctggttgccatcgacgtcaattcgggccgctcgacccgcgaa
cattcgattgaggacaccgcgcttcagaccaatctggaagcagccgaagaagttgcgcgc
cagttgcgccttcgcgaccttgcgggcctgatcgtcgttgacttcatcgacatggaagaa
aagcgcaacaatcgcgctgtcgaaaagaagatgaaggaatgcctgaaggatgaccgcgcc
cgcatccaggtgggccgcatctcgcatttcggccttctggaaatgtcgcgccagcgcatc
cgcgcatcggttctggaaagcaccatgcaggtctgcccgcattgcggcggcaccggacat
atccgttcggattcctccatggcgctccatatcatccgtggtatcgaagactatctgctg
cgccattcgggctttgatattcatgtccgcaccccggcagcgtccgcactttatgtgctc
aatcacaagcgccagattctggccgatctggaggggcgctttggcgtcgagatcagcatt
gatgccgacgaaagtgtaggaaaccagcactttgtcattgataagggtgcgccttctacc
cgccccgtcaccccgtcggcagtacagccgatggtctatgaggacgatatcgaagaccct
gaaatcccggtcgaagaagacgagaccgaagaagaagcaaggaccgatgttcaggctggc
gaagagcgcagcgaagaaaacgaccgcaagcgccgccgtcgtcgccgtcgtcgcggtggc
cgcgaacgtgacggtcgtgatctgtccgcgcaggaagaagccgtttcggaggaagcatcc
gaagaggataatgaaaccgatcaggccaatgaggccgtgtcatccgcttccatgagcgag
gaagatcgccgcaagaagcgtcgtcgcggccgccgtggcggacggaagaaccggcgtgaa
gacgacaaccgtgcgcgcagaattcctgatccggaattcgtcggttacacacctgttctg
ccggtaaaggccgaagaaagcatcggcgaagtagtggaaacggttgaaaccgtggaagca
cctgtcgttgaggccgcgccggaagaaaagcctgaaaagcccgcccgcaagccgcgtgcc
cgcaaaacagcaaaaaccgaggaagcagcggaagcagtgatcactgcggaggctgaggaa
aagcctgaaaagcccgcccgcaaaacgcgcacgcgcaagaaggctgtcgacgaagcgcct
gcagatgaagccgcagcgcccgccgaggaagtggtacctgaaaagccgaagcgccgtaca
cgcaaagctgccgccaagccggttgtggaagccgaagacgttgccgaggtgaaggaaacg
gttgcggcagaaacgcaggtggaaaccatcgcggaaccgaaaagcacagagccggtcgta
acctccagcgagagcgaagaccggaagccgaagcgttcgggctggtggcagaagaagggc
tttttctaa
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