Burkholderia cenocepacia DWS 37E-2: DM40_1394
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Entry
DM40_1394 CDS
T03488
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Pathway
bcew04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
DM40_1394 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcew03016
]
DM40_1394 (trmU)
Enzymes [BR:
bcew01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
DM40_1394 (trmU)
Transfer RNA biogenesis [BR:
bcew03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
DM40_1394 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
QueC
ThiI
Arginosuc_synth
AraC_binding
Asn_synthase
DUF7411
Motif
Other DBs
NCBI-ProteinID:
AIO41002
LinkDB
All DBs
Position
1:complement(1512462..1513646)
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AA seq
394 aa
AA seq
DB search
MSKRRVVVGMSGGVDSSVTAWLLKEQGYDVVGLFMKNWEDDDDGEYCSTRQDWIDVVSVA
DLIGIDVEAVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMSLDAEM
IATGHYARVRERDGRFELLKAFDHTKDQSYFLHRLNQAQLSKTMFPLGEIPKTKVREIAA
QIGLPNAKKKDSTGICFIGERPFRDFLNRYLPTKPGPMKTPDGKVVGEHIGLAFYTFGQR
KGIGIGGSKDGNGDPWFVAAKDIASNTLYVVQGHDHPWLLSRELVAGNVSWVAGEPPGEG
FACGAKTRYRQADAACRFSRAALSRAALGQTDDGRFSLAFDDAQWAVTPGQSAVLYDGEI
CLGGGIIEFAATGQPGQTAPASAAGHAIALAEAR
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcgccgtgtagtggtgggcatgtcgggcggcgtcgattcgtcggtgaccgcg
tggctgttgaaggaacagggctacgacgtggtcggcctgttcatgaagaactgggaagac
gacgacgacggcgaatactgctcgacgcgccaagactggatcgacgtggtatccgtcgcc
gacctgatcggcatcgacgtcgaagcggtgaacttcgcagccgaatacaaggaccgcgta
ttcgcagaattcctgcgcgaatactctgccggccgcacgccgaaccccgacgtgctgtgc
aacgccgagatcaagttcaaggcgttcctcgaccacgcgatgtcgctcgacgccgaaatg
atcgcgaccggccactacgcgcgcgtgcgcgagcgcgacggccgcttcgagctgctgaag
gcgttcgatcatacgaaagaccagtcgtacttcctgcaccggctgaaccaggcgcagttg
tcgaaaacgatgttcccgctcggcgagatcccgaagacgaaggtgcgcgagatcgctgcg
cagatcggcctgccgaacgcgaagaagaaggattcgaccggcatctgcttcatcggcgag
cggccgtttcgcgatttcctgaaccgctatcttccgacgaaacccggcccgatgaagacg
ccggacggcaaggtggtcggcgagcacatcggcctcgcgttctacacgttcggccagcgc
aagggcatcggcatcggcggcagcaaggacggcaacggcgatccgtggttcgtcgccgcg
aaggacatcgcgtcgaacacgctgtacgtcgtgcaaggccacgaccatccatggctgctg
tcgcgcgagctggtcgccggcaacgtgagctgggtcgccggcgagccgccgggcgaaggc
ttcgcatgtggcgcgaagacgcgctaccggcaggccgacgcggcgtgcaggttcagtcgg
gccgcgctcagtcgggccgcgctcggccagaccgacgacggacgcttctcgctcgcgttc
gacgacgcgcaatgggcggtcacgcccggccagtcggccgtgctgtacgacggcgagatc
tgcctcggcggcggcatcatcgagttcgcggccaccggccagcccggccagaccgcgccg
gcatcggcggcaggtcacgcaatcgcgctcgccgaagcacgctga
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