Burkholderia cenocepacia DWS 37E-2: DM40_1469
Help
Entry
DM40_1469 CDS
T03488
Name
(GenBank) beta-eliminating lyase family protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Pathway
bcew00260
Glycine, serine and threonine metabolism
bcew00460
Cyanoamino acid metabolism
bcew00630
Glyoxylate and dicarboxylate metabolism
bcew00670
One carbon pool by folate
bcew00680
Methane metabolism
bcew01100
Metabolic pathways
bcew01110
Biosynthesis of secondary metabolites
bcew01120
Microbial metabolism in diverse environments
bcew01200
Carbon metabolism
bcew01230
Biosynthesis of amino acids
bcew01240
Biosynthesis of cofactors
bcew04981
Folate transport and metabolism
Module
bcew_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DM40_1469
09102 Energy metabolism
00680 Methane metabolism
DM40_1469
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DM40_1469
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DM40_1469
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DM40_1469
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DM40_1469
Enzymes [BR:
bcew01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DM40_1469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AIO42412
LinkDB
All DBs
Position
1:1598817..1600064
Genome browser
AA seq
415 aa
AA seq
DB search
MFDRAQSTIANVDPELFAAIEQENRRQEDHIELIASENYTSPAVMAAQGSQLTNKYAEGY
PGKRYYGGCEYVDVVEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAMLKPGDTIMGM
SLAHGGHLTHGSPVNMSGKWFNVVSYGLNENEDIDYDAAEKLANEHKPKLIVAGASAFAL
KIDFERLAQIAKSVGAYLMVDMAHYAGLIAAGVYPNPVPHADFVTTTTHKSLRGPRGGVI
LMKAEYEKPINSAIFPGIQGGPLMHVIAAKAVAFKEALSPEFKAYQQKVVENARVLAETL
VKRGLRIVSGRTESHVMLVDLRAKNITGKAAEAALGAAHITVNKNAIPNDPEKPFVTSGI
RLGSPAMTTRGFGPAEAEQVGNLIADVLENPEDAATIERVRAQVAELTKRFPVYR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacagagcccaaagcaccatcgcgaacgtcgatcccgaactctttgcagcgatc
gagcaggaaaaccgccgccaggaagatcacatcgagctgatcgcgtcggagaactacacg
agcccggccgtgatggccgcacagggctcgcagctcacgaacaagtacgcggaaggttac
ccgggcaagcgctactacgggggctgcgaatacgtcgacgtggtcgagcagttggcgatc
gaccgtgtgaagcagctgtttggcgcggaagcggcgaacgtgcagccgaactcgggttcg
caggcgaaccagggcgtgttcttcgcgatgctcaagccgggcgacacgatcatgggcatg
agcctcgcgcacggcggccacctgacgcacggctcgccggtgaacatgtcgggcaagtgg
ttcaacgtcgtcagctacgggctgaacgaaaacgaagacatcgactacgacgcggccgag
aagctggcgaacgagcacaagccgaagctgattgtcgcgggcgcatcggcgttcgcgctg
aagatcgatttcgagcgtctggcgcagattgcgaagtcggtgggcgcgtacctgatggtc
gacatggcgcactacgcggggctgatcgcggcgggcgtgtatccgaacccggtgccgcac
gccgacttcgtgacgacgacgacgcacaagagcctgcgcggcccgcgcggcggcgtgatc
ctgatgaaggcggagtacgagaagccgatcaattcggcgatcttcccgggtatccagggc
ggcccgctgatgcacgtgatcgcggcgaaggccgttgcgttcaaggaagcgctgtcgccg
gagttcaaggcgtatcagcagaaggtggtggagaacgcacgcgtgctggcagaaacgctg
gtcaagcgcgggctgcggatcgtgtcgggccgcacggaaagccacgtgatgctggtcgac
ctgcgcgcgaagaacatcacgggcaaggcagcggaagcggcgctcggcgccgcgcacatc
acggtgaacaagaacgcgatcccgaacgatccggaaaagccgttcgtgacgagcggcatc
cgcctgggctcgccggcgatgacgacgcgcggcttcgggccggcggaagcggagcaggtc
ggcaacctgattgccgacgtgctcgagaacccggaagacgcggcgacgatcgagcgcgtg
cgcgcgcaggtggccgagctgaccaagcgtttcccggtctatcgctga
DBGET
integrated database retrieval system
