Burkholderia cenocepacia DWS 37E-2: DM40_1664
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Entry
DM40_1664 CDS
T03488
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Pathway
bcew03030
DNA replication
bcew03430
Mismatch repair
bcew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DM40_1664
03430 Mismatch repair
DM40_1664
03440 Homologous recombination
DM40_1664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcew03032
]
DM40_1664
03400 DNA repair and recombination proteins [BR:
bcew03400
]
DM40_1664
Enzymes [BR:
bcew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DM40_1664
DNA replication proteins [BR:
bcew03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DM40_1664
DNA repair and recombination proteins [BR:
bcew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DM40_1664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AIO41938
LinkDB
All DBs
Position
1:1792599..1793726
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AA seq
375 aa
AA seq
DB search
MSDSRPSDPASEQPLVFVDLETTGGSSAEHRITEIGVVEIGPLGVSTWTTLVNPGQPIPP
LIQQLTGISEEMVRDAPSFASLAPALFERLDGKLFVAHNASFDRGFLRAEFERAGIAFNP
DVLCTVRLSRALFPRESRHGLDALIERHGLVPAARHRALADADLLWQFWRRLHEIVPIER
LRDQIARTTRHFRLGGDLTEAWLDTAPAGCGAYALFGDGDAALYVGRSVRVRQRLRALLT
GERRSSKEMRLAQQVRRVEWQETGNELGAMLAEAQWIAQLRPSYNRRPAANAARPGSAPW
PFDGAVAFEASGERRFFHVIDGWRYLGAAESLDAAAQLAADGPERSFEPHTHRLLQTHLA
RGLQLIPLAAFVPAG
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattcccgtccgtccgatcccgccagcgaacagccgctcgttttcgtcgatctt
gaaaccaccggcggctcgtccgccgaacaccgcatcaccgaaatcggcgtggtcgaaatc
gggccgctcggcgtatcgacgtggacgacgctcgtcaacccggggcagccgatccccccc
ttgatccagcaactgaccggaatttcggaggagatggtgcgagatgcgccgtcgttcgcg
tcgctcgcgcccgcgttgttcgagcgactcgacggcaagctgttcgttgcgcacaacgcg
agcttcgaccgcggcttcctgcgagccgaattcgagcgtgccggcattgcgttcaatccg
gacgtgctgtgcacggtgcggttgtcgcgcgcgctgtttccgcgcgagtcgcggcatggc
ctcgatgcgttgatcgagcggcatggcctcgtaccggcggctcgccaccgggcgctcgcc
gatgccgatctgctgtggcagttctggcggcgactgcacgaaatcgtgccgatcgagcgg
ctgcgcgaccagatcgcgcgcacgacgcgtcactttcgcctgggcggtgacctgaccgaa
gcgtggctcgataccgcgccggccggatgcggagcgtacgcgctgttcggcgacggcgat
gcagccctgtacgtcgggcgcagcgtgcgcgtgcggcagcgcctgcgcgcgctgctgacc
ggcgagcgacgctcgtcgaaggaaatgcggcttgcccagcaggtgcggcgtgtcgaatgg
caggagaccggcaacgaactgggcgcgatgctcgctgaagcgcagtggatcgcgcagttg
cgtccgtcatacaaccggcgtcccgccgcgaacgcggcgcggccgggcagcgcgccctgg
ccgttcgacggcgcggtcgcgttcgaagcgagcggcgagcgccgcttttttcacgtgatc
gacggctggcgctacctcggtgcagccgagtcgctcgatgcggccgcgcagctcgcggcc
gacgggccggaacggtcgttcgagccgcacacccatcgcctgctgcagacccatctcgca
cgcggactgcaactgatcccgctcgcggcgttcgtgccggctggctga
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