Burkholderia cenocepacia DWS 37E-2: DM40_178
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Entry
DM40_178 CDS
T03488
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Pathway
bcew03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DM40_178 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcew03400
]
DM40_178 (xseA)
Enzymes [BR:
bcew01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
DM40_178 (xseA)
DNA repair and recombination proteins [BR:
bcew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
DM40_178 (xseA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DHQ_synthase
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AIO42529
LinkDB
All DBs
Position
1:complement(193421..194803)
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AA seq
460 aa
AA seq
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MLSDSPFSAPGATRGGDEVIPVSALNRAISSMLERSFPLLWISGEVSNFTRAASGHWYFS
IKDQQAQMRCVMFRGRAQYAEFTPREGDRIEVRAVVTMYEPRGEVQLNVEAVRRTGQGRL
YEAFLRLKAQLEAEGLFAPERKRPLPAHPRAIGIVTSLQAAALRDVLTTLARRAPHIPVV
VYPAPVQGAGSAEKLVAAVQTANARREVDVLLVCRGGGSIEDLWSFNDEALARAIAASEL
PVVSGVGHETDFTIADFAADLRAPTPTGAAELASPQRALLLRELGDRQRALARCLERGLE
QRAQQLDWLARRLVSPGERLKRQRVHVEQLAVRLASAASRPVRDARARFALAQLRWQRAR
PDPTQARHALAGLSQRLALALQRRHERDTARVSACAARLEVLSPQRTLERGYAALIDTQT
GRAVRAPSALKPQRRLTVHLAEGSADVSLADVQPRLTDTI
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctttccgactctcccttttccgctcccggcgcgacccgcggcggtgacgaagtgatt
cccgtttcggcgctcaatcgcgcgatttcgtcgatgctcgagcgctcgtttccgctgctg
tggatctcgggtgaagtgtcgaatttcacgcgcgccgcgagcggtcactggtacttctcg
atcaaggaccagcaggcgcagatgcgttgcgtgatgtttcgcggccgtgcgcagtatgcg
gaattcacgccgcgcgaaggcgaccggatcgaggtgcgcgcagtcgtcacgatgtacgag
ccgcgcggcgaagtgcagctcaacgtcgaggccgtgcggcgcaccggtcaggggcgtctg
tacgaggcgttcctccgcctgaaggcgcagctcgaggccgaaggactctttgcgcccgaa
cgcaagcggccgctgccggcccatccgcgcgcaatcggcatcgtcacgtcgctgcaggcc
gccgcgctgcgcgacgtgctgaccacgctcgcacgccgcgcgccgcacattccggtggtc
gtctatcccgcgcccgtgcagggggccggctcggcggagaaactcgtcgctgcggtgcag
acggcgaacgcgcggcgcgaggtcgacgtgctgctcgtctgtcgcggcggcgggtcgatc
gaagatctgtggtcgttcaacgacgaagcgctggcgcgtgcgatcgcggcgagcgaactg
ccggtcgtcagcggtgtcggccacgaaaccgatttcacgatcgcggatttcgcagccgac
ttgcgcgcgccgacgcccaccggcgcagcggagctcgcgagcccgcagcgcgccttgctg
ctgcgcgagctcggcgatcgtcagcgcgccctggcgcgctgtctggagcgcgggctcgag
cagcgtgcgcagcagctcgactggctcgcgcgccggctcgtcagcccgggcgaacggctg
aagcggcagcgcgttcacgtcgagcagctcgcggtgcggctcgcgtcggcggcgtcgcgg
ccggtgcgcgatgcgcgtgcgcgctttgcgctcgcgcaattgcgctggcagcgcgcgcgg
cccgacccgacgcaggcgcggcatgcactcgccgggctgtcgcaacgtcttgcgctcgcg
ctgcagcgccgtcacgagcgcgacaccgcgcgcgtgtcggcgtgcgcggcgcggctcgag
gtgctgagcccgcagcgcacgctcgagcgcggctatgcggcgctgatcgacacgcagacc
ggccgagcggtgcgggcgccgagcgcgctgaagccgcagcgccggctgaccgtccatctc
gccgaaggctcggccgacgtgtcgctcgccgacgtgcagccgcgcctgaccgatacgatc
tga
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