Burkholderia cenocepacia DWS 37E-2: DM40_2129
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Entry
DM40_2129 CDS
T03488
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bcew03016
]
DM40_2129 (truB)
Enzymes [BR:
bcew01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DM40_2129 (truB)
Transfer RNA biogenesis [BR:
bcew03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DM40_2129 (truB)
Prokaryotic type
DM40_2129 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AIO40842
LinkDB
All DBs
Position
1:2300027..2300959
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AA seq
310 aa
AA seq
DB search
MTTAASQRPRVPRRALDGVLLLDKPVGLSSNDALIRAKRLLLAKKAGHTGTLDPLASGLL
PLCFGEATKFSQDLLEADKTYEATMRLGVRTATGDAEGDVLDTRAVQCDRAAVEAALARF
IGEIVQVPPMYSALKRDGKPLYEYARAGQTVEREGRNVTIHALDLLACELPDVTFRVTCS
KGTYVRTLAEDLGEALGCGAHLTMLRRTGVGALTLEHAVTLDALSDAAEAARDAWLQPVD
ALLSTFPRVQLDEASAKRFLHGQRLPLSALDPIDAADGARVRVYDAQRLLGVARKANGVL
APERLVVTAA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgcagcttcccagcgcccgcgcgtgccgcgccgcgcgctggacggtgttctc
ctgctcgacaagccggtcggcctgtcgagcaacgacgcattgattcgcgcgaagcgcctg
ctgctcgcgaaaaaggccggccataccggtacgctggatccgctggcgtcgggactgttg
ccgctgtgcttcggcgaagcgacgaagttctcgcaggacctgctggaagcggacaagacc
tacgaagcgacgatgcgtctcggtgtgcgtacggcgaccggcgatgccgaaggcgacgtg
ctcgacacgcgcgccgtccaatgcgatcgcgcggccgtggaagcggcactcgcgcgtttt
atcggcgagatcgtgcaggtgccgccgatgtattcggcgctcaagcgcgacggcaagccg
ctgtacgaatatgcgcgcgccggccagacggttgaacgggaaggccgcaacgtgacgatc
catgcgctcgacctgctcgcttgcgaactgccggacgtgacgtttcgcgtgacgtgcagc
aagggcacttacgtgcgcacgctcgcggaagatctcggtgaggcgctcggctgcggcgcc
catttgacgatgctgcgccggacgggcgtcggcgcgctcacgctcgagcacgcggtgacg
ctcgatgcgctgtccgacgctgccgaagcggcgcgcgacgcgtggctccagccggtcgac
gcgttgctgtcgacgtttccgcgcgtgcagctcgacgaagccagcgcgaagcggtttctg
catggccagcgcttgccgctgtcggcactcgatccgatcgacgcggccgacggcgcgcgc
gtgcgcgtgtacgacgcacagcgactgctcggcgttgctcgcaaggcgaacggcgtgctc
gcccccgagcggctcgtggtgacggctgcgtga
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