Burkholderia cenocepacia DWS 37E-2: DM40_2240
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Entry
DM40_2240 CDS
T03488
Name
(GenBank) bacterial regulatory helix-turn-helix , lysR family protein
KO
K13635
LysR family transcriptional regulator, cys regulon transcriptional activator
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcew03000
]
DM40_2240
Transcription factors [BR:
bcew03000
]
Prokaryotic type
Helix-turn-helix
LysR family
DM40_2240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
PBP_like_2
MarR
HTH_30
SBP_bac_11
Mga
Motif
Other DBs
NCBI-ProteinID:
AIO42847
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All DBs
Position
1:2407663..2408589
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AA seq
308 aa
AA seq
DB search
MNFQQLRFVREAVRQNMNLTEVANVLYTSQSGVSKQIKDLEDELGVDIFIRRGKRLTGLT
EPGKAVHQLIERMLLDAENLRRVARQFADQDSGHLVVATTHTQARYALPKVIRQFTEVFP
KVHLALRQGSPQQIAQMILNGEADLGISTEALDRYPDIVTFPCYSWHHTVVVPKGHPLVG
RENLTLDEIAEYPIITYDQDFTGRSHIDQAFAQAGAVPDVVLTAIDADVIKTYVELGMGI
GVVAAMAFDPQRDTGLVALDTQHLFEASTTRVGLRKGAFLRAYAYRLIEMFAPHLNEAEI
AGMLREAV
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcagcaattgcgtttcgtgcgagaggccgtgcgccagaacatgaacctgacg
gaagtcgcgaacgtgctgtacacgtcgcagtcgggcgtgtcgaagcagatcaaggatctc
gaggatgaactgggcgtcgacatcttcatccggcgcggcaagcggctcaccgggctcacg
gagccgggcaaggccgtgcaccagctgatcgagcggatgctgctcgacgcggagaacctg
cgccgcgtcgcgcgccagttcgcggaccaggacagcggccacctcgtcgtcgcaacgacg
cacacgcaggcgcgctacgcgctgccgaaggtgatccggcagttcaccgaggtgttcccg
aaggtgcatcttgcgctgcgccagggcagcccgcagcagatcgcgcagatgatcctgaac
ggcgaagccgatctcggcatctcgaccgaagcgctcgatcgctatccggacatcgtcacg
tttccgtgctattcgtggcatcacacggtcgtcgtgccgaagggccatccgctcgtcggc
cgcgagaacctcacgctcgacgaaatcgccgaatatccgatcatcacgtacgaccaggac
ttcaccggccgctcgcatatcgaccaggcgttcgcgcaggcgggcgcggtgcccgacgtc
gtgctgaccgcgatcgacgcggacgtgatcaagacttacgtcgagctcggcatggggatc
ggcgtcgtcgccgcaatggcgttcgatccgcagcgcgacacggggctcgtcgcgctcgac
acgcagcatttgttcgaggcgagcacgacgcgcgtcggcttgcgcaagggcgcgttcctg
cgcgcgtatgcgtaccggctgatcgagatgttcgcgccgcacctgaacgaagcggaaatc
gccgggatgctgcgcgaagcagtctga
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