Burkholderia cenocepacia DWS 37E-2: DM40_2405
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Entry
DM40_2405 CDS
T03488
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Pathway
bcew02024
Quorum sensing
bcew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM40_2405 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DM40_2405 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcew03019
]
DM40_2405 (hfq)
03036 Chromosome and associated proteins [BR:
bcew03036
]
DM40_2405 (hfq)
Messenger RNA biogenesis [BR:
bcew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DM40_2405 (hfq)
Chromosome and associated proteins [BR:
bcew03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
DM40_2405 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AIO40692
UniProt:
A0A071MNF0
LinkDB
All DBs
Position
1:complement(2608695..2608934)
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AA seq
79 aa
AA seq
DB search
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARPVNFHPDAEASS
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaaagggcaattgttacaagacccgtttttgaacgcactgcgcaaagagcac
gttcccgtttcgatctatctcgtcaacggcatcaagctgcaagggaacattgaatcgttc
gaccagtacgtcgtgttgctccgtaatacggtgacccagatggtttacaagcacgccatc
tcgacggtcgtgccggcgcgcccggtgaatttccacccggacgcggaagcctcgtcctaa
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