KEGG   Burkholderia cenocepacia DWS 37E-2: DM40_2425
Entry
DM40_2425         CDS       T03488                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
bcew  Burkholderia cenocepacia DWS 37E-2
Pathway
bcew03030  DNA replication
bcew03430  Mismatch repair
bcew03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bcew00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DM40_2425 (dnaX)
   03430 Mismatch repair
    DM40_2425 (dnaX)
   03440 Homologous recombination
    DM40_2425 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bcew03032]
    DM40_2425 (dnaX)
   03400 DNA repair and recombination proteins [BR:bcew03400]
    DM40_2425 (dnaX)
Enzymes [BR:bcew01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DM40_2425 (dnaX)
DNA replication proteins [BR:bcew03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DM40_2425 (dnaX)
DNA repair and recombination proteins [BR:bcew03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DM40_2425 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 DNAX_ATPase_lid DNA_pol3_gamma3 DNA_pol3_tau_5 AAA RuvB_N AAA_16 AAA_14 AAA_22 AAA_5 DUF3646 AAA_18 AAA_assoc_2 TsaE AAA_30 Mg_chelatase AAA_2 Ribosomal_S7 Glyco_tranf_2_5 nSTAND3 AAA_24
Other DBs
NCBI-ProteinID: AIO40931
LinkDB
Position
1:complement(2628618..2631014)
AA seq 798 aa
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGVTSQPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLERILGEEQIAFEQQALRLLARAAQGSMRDALSLTDQAIAYSANEVTESAVSGM
LGALDQTYMVRLLDALAGGNGPEILAIADEMSLRSLSFSTALQDLASLLHRIAWAQFAPG
SVLDEWPEATDLRRFAEALSPEQVQLFYQIATVGRAELGLAPDEYAGFTMTLLRMLAFEP
TIGTGSAPGGQPATPRAMPGPAPRAAAAAGAAAPRASTPAAAGAARPHAAAPAAPPVPAQ
SDDAGIAPVVTAALVSTAAVSPASASAPASVPTSASADAPVATQPAATTPTQPAQAVDAP
PAASSEPEPAAVAEREDEPAALAEPASTPAPAPRAAPVEPAARPSARGGAAAALDVLRNA
GMRVSSDRSRAGAAPKPAAQPAVEKPAAARPAVPVPTPRAAARAPQAADTRQAPPPWEDI
PPDEYVPLSADEMFGGAADDGFVPVFDSGPDDVRIAPKPVEVRVSAPADTRPLPPAIALD
PIGFDGEWPALAARLPLKGVAYQLAFNSELTAVDATTLKLSVPVPQYADTAQVAKLKAAL
ADALGRPVEVAVEVGPARRTAAALDAAARAARQREAEQDIHGDPFVQQLVREFGARIVEG
SVRPLADPTPDGTPPTLH
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgacctatcaagttctcgcacgcaagtggcgtccgaaggatttcgcttcgctcgtcggc
caggagcacgtcgtcagggcgctcacgcacgcgctcgacggtgggcgtctccatcacgcc
tatctgtttaccggaacgcgcggcgtcggcaagacgacgttgtcgcggatcttcgcgaag
gcgctcaactgtgaaacgggcgtcacgtcgcagccgtgcggcgtgtgccgcgcgtgccgc
gagatcgacgaaggccgcttcgtcgactacgtcgaaatggacgccgcgagcaatcgcggc
gtcgacgagatggccgcgctgctggagcgcgcggtctacgcgccggtggatgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctgacgaaccacgcgttcaacgcgatgctg
aagacgctcgaggagccgccgccgcacgtcaagttcattctcgccaccaccgatccgcag
aagattccggtcaccgtgctgtcgcgctgcctgcagttcaacctgaagcagatgccggca
ggccatatcgtgtcgcatctcgagcggatcctcggcgaagagcagatcgcgttcgagcag
caggcgctgcgcctgctcgcgcgtgccgcgcagggcagcatgcgcgacgcgctgtcgctg
accgaccaggcgatcgcttactcggcgaatgaagtgaccgaatcggcggtgtcgggcatg
ctcggcgcgctcgaccagacttacatggtgcgcctgctcgatgcgctcgcgggcggaaac
ggtccggagatcctggcgatcgcggacgaaatgtcgctgcgcagcctgtccttttcgacc
gcgctccaggatctcgcgagcctgttgcaccggatcgcgtgggcgcagttcgcgccgggc
tccgtcctcgacgaatggccggaagcgaccgatttgcggcgcttcgcggaggcgttgagt
cccgagcaggtgcaattgttctatcagatcgcgacggtcggacgtgcggagctcgggctc
gcgccggacgaatatgcaggcttcacgatgacgttgctgcggatgctcgcgttcgagccg
accatcggtaccggcagtgcgccgggcggccaaccggccacgccgcgtgcgatgcctggg
cccgcgccgcgtgctgctgccgctgccggcgctgctgcgccgcgggcttcgacaccggcg
gccgcgggtgctgcgcgtccgcatgctgccgcaccggctgcaccgccggtacctgcgcag
tccgacgatgcggggattgcgcctgtcgtgacggccgcgcttgtctcgacagcggcagtg
agtccggcatcggcttcggcgccggcatcagtaccaacatcggcatccgccgacgcgccg
gtcgccacgcagccggcagcgaccacgccaacccagccggcacaggcggtcgatgcgccc
ccggctgcctccagcgaacctgaaccggccgccgttgccgagcgcgaggacgaacccgcg
gcgctcgccgaaccggcgtcgacgccggcgccggcgccgcgtgctgcaccggtcgagccg
gccgcacgtccgtctgcccgcggtggggcggcagcagcgctcgacgtgctgcgcaatgcc
ggcatgcgtgtgtcgtccgaccggtcgcgggccggcgcggcgccgaagccggcggcccaa
ccggccgtcgagaagcccgcggcggcgcgtcctgccgtaccggtgccgacgccgcgcgcg
gccgcccgcgcgccgcaagccgccgacacgcgccaggcgccgccgccgtgggaggacatc
ccgccggacgaatacgtgccgctgagcgccgacgagatgttcggcggcgcggccgacgac
ggcttcgtcccggtattcgacagcggccccgacgacgtgcgcatcgcgccgaagccggtg
gaggtccgcgtgtccgcgccggccgatacccgcccgctgccgcccgcgatcgcgctcgat
cccatcggcttcgacggcgaatggccggcgctggccgcgcggctgccgctgaagggggtc
gcgtatcagcttgcgttcaacagcgaactgacggcggtcgacgcgaccacgctgaaattg
tccgtgccggtgccgcagtatgcggacaccgcgcaggtggcgaaactcaaggccgcgctg
gccgacgcgctcggcaggccggtcgaggtcgcggtcgaggttggacctgcgcggcgcacc
gcggcagcgctcgacgcggctgcacgcgcggcacgccagcgcgaggcggagcaggacatt
cacggcgatccgttcgtccagcagctcgtgcgtgagttcggcgcgcgcatcgtcgagggc
tccgtgcggccgctcgccgatccgacacccgacggcacgccgccgacgctgcattga

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