Burkholderia cenocepacia DWS 37E-2: DM40_2425
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Entry
DM40_2425 CDS
T03488
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Pathway
bcew03030
DNA replication
bcew03430
Mismatch repair
bcew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DM40_2425 (dnaX)
03430 Mismatch repair
DM40_2425 (dnaX)
03440 Homologous recombination
DM40_2425 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcew03032
]
DM40_2425 (dnaX)
03400 DNA repair and recombination proteins [BR:
bcew03400
]
DM40_2425 (dnaX)
Enzymes [BR:
bcew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DM40_2425 (dnaX)
DNA replication proteins [BR:
bcew03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DM40_2425 (dnaX)
DNA repair and recombination proteins [BR:
bcew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DM40_2425 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_14
AAA_22
AAA_5
DUF3646
AAA_18
AAA_assoc_2
TsaE
AAA_30
Mg_chelatase
AAA_2
Ribosomal_S7
Glyco_tranf_2_5
nSTAND3
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AIO40931
LinkDB
All DBs
Position
1:complement(2628618..2631014)
Genome browser
AA seq
798 aa
AA seq
DB search
MTYQVLARKWRPKDFASLVGQEHVVRALTHALDGGRLHHAYLFTGTRGVGKTTLSRIFAK
ALNCETGVTSQPCGVCRACREIDEGRFVDYVEMDAASNRGVDEMAALLERAVYAPVDARF
KVYMIDEVHMLTNHAFNAMLKTLEEPPPHVKFILATTDPQKIPVTVLSRCLQFNLKQMPA
GHIVSHLERILGEEQIAFEQQALRLLARAAQGSMRDALSLTDQAIAYSANEVTESAVSGM
LGALDQTYMVRLLDALAGGNGPEILAIADEMSLRSLSFSTALQDLASLLHRIAWAQFAPG
SVLDEWPEATDLRRFAEALSPEQVQLFYQIATVGRAELGLAPDEYAGFTMTLLRMLAFEP
TIGTGSAPGGQPATPRAMPGPAPRAAAAAGAAAPRASTPAAAGAARPHAAAPAAPPVPAQ
SDDAGIAPVVTAALVSTAAVSPASASAPASVPTSASADAPVATQPAATTPTQPAQAVDAP
PAASSEPEPAAVAEREDEPAALAEPASTPAPAPRAAPVEPAARPSARGGAAAALDVLRNA
GMRVSSDRSRAGAAPKPAAQPAVEKPAAARPAVPVPTPRAAARAPQAADTRQAPPPWEDI
PPDEYVPLSADEMFGGAADDGFVPVFDSGPDDVRIAPKPVEVRVSAPADTRPLPPAIALD
PIGFDGEWPALAARLPLKGVAYQLAFNSELTAVDATTLKLSVPVPQYADTAQVAKLKAAL
ADALGRPVEVAVEVGPARRTAAALDAAARAARQREAEQDIHGDPFVQQLVREFGARIVEG
SVRPLADPTPDGTPPTLH
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcaagttctcgcacgcaagtggcgtccgaaggatttcgcttcgctcgtcggc
caggagcacgtcgtcagggcgctcacgcacgcgctcgacggtgggcgtctccatcacgcc
tatctgtttaccggaacgcgcggcgtcggcaagacgacgttgtcgcggatcttcgcgaag
gcgctcaactgtgaaacgggcgtcacgtcgcagccgtgcggcgtgtgccgcgcgtgccgc
gagatcgacgaaggccgcttcgtcgactacgtcgaaatggacgccgcgagcaatcgcggc
gtcgacgagatggccgcgctgctggagcgcgcggtctacgcgccggtggatgcgcgcttc
aaggtctacatgatcgacgaagtgcacatgctgacgaaccacgcgttcaacgcgatgctg
aagacgctcgaggagccgccgccgcacgtcaagttcattctcgccaccaccgatccgcag
aagattccggtcaccgtgctgtcgcgctgcctgcagttcaacctgaagcagatgccggca
ggccatatcgtgtcgcatctcgagcggatcctcggcgaagagcagatcgcgttcgagcag
caggcgctgcgcctgctcgcgcgtgccgcgcagggcagcatgcgcgacgcgctgtcgctg
accgaccaggcgatcgcttactcggcgaatgaagtgaccgaatcggcggtgtcgggcatg
ctcggcgcgctcgaccagacttacatggtgcgcctgctcgatgcgctcgcgggcggaaac
ggtccggagatcctggcgatcgcggacgaaatgtcgctgcgcagcctgtccttttcgacc
gcgctccaggatctcgcgagcctgttgcaccggatcgcgtgggcgcagttcgcgccgggc
tccgtcctcgacgaatggccggaagcgaccgatttgcggcgcttcgcggaggcgttgagt
cccgagcaggtgcaattgttctatcagatcgcgacggtcggacgtgcggagctcgggctc
gcgccggacgaatatgcaggcttcacgatgacgttgctgcggatgctcgcgttcgagccg
accatcggtaccggcagtgcgccgggcggccaaccggccacgccgcgtgcgatgcctggg
cccgcgccgcgtgctgctgccgctgccggcgctgctgcgccgcgggcttcgacaccggcg
gccgcgggtgctgcgcgtccgcatgctgccgcaccggctgcaccgccggtacctgcgcag
tccgacgatgcggggattgcgcctgtcgtgacggccgcgcttgtctcgacagcggcagtg
agtccggcatcggcttcggcgccggcatcagtaccaacatcggcatccgccgacgcgccg
gtcgccacgcagccggcagcgaccacgccaacccagccggcacaggcggtcgatgcgccc
ccggctgcctccagcgaacctgaaccggccgccgttgccgagcgcgaggacgaacccgcg
gcgctcgccgaaccggcgtcgacgccggcgccggcgccgcgtgctgcaccggtcgagccg
gccgcacgtccgtctgcccgcggtggggcggcagcagcgctcgacgtgctgcgcaatgcc
ggcatgcgtgtgtcgtccgaccggtcgcgggccggcgcggcgccgaagccggcggcccaa
ccggccgtcgagaagcccgcggcggcgcgtcctgccgtaccggtgccgacgccgcgcgcg
gccgcccgcgcgccgcaagccgccgacacgcgccaggcgccgccgccgtgggaggacatc
ccgccggacgaatacgtgccgctgagcgccgacgagatgttcggcggcgcggccgacgac
ggcttcgtcccggtattcgacagcggccccgacgacgtgcgcatcgcgccgaagccggtg
gaggtccgcgtgtccgcgccggccgatacccgcccgctgccgcccgcgatcgcgctcgat
cccatcggcttcgacggcgaatggccggcgctggccgcgcggctgccgctgaagggggtc
gcgtatcagcttgcgttcaacagcgaactgacggcggtcgacgcgaccacgctgaaattg
tccgtgccggtgccgcagtatgcggacaccgcgcaggtggcgaaactcaaggccgcgctg
gccgacgcgctcggcaggccggtcgaggtcgcggtcgaggttggacctgcgcggcgcacc
gcggcagcgctcgacgcggctgcacgcgcggcacgccagcgcgaggcggagcaggacatt
cacggcgatccgttcgtccagcagctcgtgcgtgagttcggcgcgcgcatcgtcgagggc
tccgtgcggccgctcgccgatccgacacccgacggcacgccgccgacgctgcattga
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