Burkholderia cenocepacia DWS 37E-2: DM40_2427
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Entry
DM40_2427 CDS
T03488
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Pathway
bcew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM40_2427 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bcew03021
]
DM40_2427 (rho)
03019 Messenger RNA biogenesis [BR:
bcew03019
]
DM40_2427 (rho)
Transcription machinery [BR:
bcew03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DM40_2427 (rho)
Messenger RNA biogenesis [BR:
bcew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DM40_2427 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIO40674
UniProt:
A0A071MBD8
LinkDB
All DBs
Position
1:2632177..2633439
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AA seq
420 aa
AA seq
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MHLSELKSLHVSELIEMANGLEIENANRLRKQELMFAILKKRAKTGETIFGDGTLEVLPD
GFGFLRSPEMSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
GQPPEASKHKIMFENLTPLHPNKPLSLEREMRGEENVTGRIIDMIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIKQNHPDVILFVLLIDERPEEVTEMQRSVAGEVIASTFDEPATRHV
QVAEMVIEKAKRLVEMKHDVVILLDSITRLARAYNTVIPASGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPSINL
NKSGTRREEMLIKPEILQKIWVLRKFIHDMDEVEAMEFLLDKIRQTKSNSEFFDLMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatttatccgagctcaagtctctgcacgtgtccgaactgatcgaaatggccaatggc
ctggagatcgaaaacgcgaaccgcctgcgcaagcaggagttgatgttcgccattctcaaa
aagcgcgccaagacgggagagacgatcttcggcgacggcacgctcgaagtgctgccggac
ggcttcggcttcctgcgctcgcccgaaatgtcgtacctcgccagcaccgacgacatctac
atcagcccgtcgcagatccgccgcttcaacttgcacaccggcgacacgatcgaaggtgag
gtccgcacgccgaaggacggcgagcgctacttcgcgctggtcaaggtcgacaaagtcaac
gggcagccgcccgaggcctcgaaacacaagatcatgttcgagaacctcacgccgctgcat
ccgaacaagccgctgtcgctcgaacgcgaaatgcgcggcgaagaaaacgtcaccggccgc
atcatcgacatgatcgcgccgatcggcaagggccagcgcggcctgctggtcgcgtcgccg
aagtcgggcaagaccgtgatgctccagcacatcgcgcatgcgatcaagcagaaccacccg
gacgtgatcctgttcgtgctgctgatcgacgagcgccctgaagaagtgaccgaaatgcag
cgctcggtcgcaggcgaagtgatcgcatcgacgttcgacgaaccggccacgcgtcacgtg
caggtcgccgaaatggtgatcgagaaggccaagcgtctcgtcgaaatgaagcacgacgtc
gtgattctgctcgactcgatcacgcgtctcgcccgtgcgtacaacaccgtgatccctgca
tcgggcaaggtgctgacgggtggtgtcgacgcgaacgcgctgcaacgtccgaagcgcttc
ttcggcgcggcgcgcaacatcgaggaaggcggttcgctgacgatcatcggcaccgcgctg
atcgaaaccggcagccgcatggacgacgtgatctacgaagagttcaagggcaccggcaac
atggaagtgcacctcgagcgccgtctcgcggaaaagcgcgtgtatccgtcgatcaacctg
aacaagtcgggcacgcgtcgcgaagaaatgctgatcaagcccgagatcctgcaaaagatc
tgggtgctgcgcaagttcatccacgacatggatgaagtcgaggcgatggaattcctgctc
gacaaaatccgccagacgaagagcaactcagagttcttcgacctgatgcgccgcggcggc
tga
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