Burkholderia cenocepacia DWS 37E-2: DM40_2756
Help
Entry
DM40_2756 CDS
T03488
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Pathway
bcew03410
Base excision repair
bcew03430
Mismatch repair
bcew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DM40_2756 (recJ)
03430 Mismatch repair
DM40_2756 (recJ)
03440 Homologous recombination
DM40_2756 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcew03400
]
DM40_2756 (recJ)
DNA repair and recombination proteins [BR:
bcew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DM40_2756 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DM40_2756 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DM40_2756 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AIO41423
LinkDB
All DBs
Position
1:2975348..2977045
Genome browser
AA seq
565 aa
AA seq
DB search
MTRIVTRPVAPADAEALARHGLHPVLARLYASRGVQSPADIEIALARLLPPTELKGCADA
ATLLANAIADRRRLLVVADYDCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEI
VELAAARKPDLLITVDNGIASVAGVEAANARGIDVLVTDHHLPGDALPAARAIVNPNQPG
CTFPSKHIAGVGVMFYVLLALRAELRRRGAFASKEAEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGVAALFRAAGRETRTASGFDLGFGVGPRLNAAGRLSDMSL
GIECLITDDIGRAWELAQQLDAMNRERREIEAGMQQQALADLAALDPADACTITLFNPAW
HQGVIGIVAGRLKEKFHRPSFTFAHADDAGARVKGSGRSIPGFHLRDALDLVSKREPDLI
VAFGGHAMAAGLTLDTANVPRFAAAFEAVAREWLSDDALARVIETDGELEEAYFTPQFVG
LLDEAVWGQGFPAPLFSGEFDVVSQSLVKEKHLKLQLARGRQRFNAIWFNHTDPLPASAL
IAYRLVADTWNGVTRVQLVVEHAAG
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacccggatcgttacccgccccgtcgcgcccgccgacgccgaagcgctcgcacgccac
gggctgcaccctgtcctcgcgcgcctgtatgcgtcgcgcggcgtgcaatccccggccgac
atcgaaatcgcgctcgcacgcctgttgccccccaccgagctgaagggctgcgcggacgcc
gcaacgctgctcgccaatgcgatcgcggaccgccgccgcctgctggtcgtcgccgattac
gactgcgacggcgccaccgcgtgtgcggtcgcggtgcgggggctccgcatgttcggcgcg
cagatcgactacctggtgccgaaccgcttcgaatacggctacgggctcacgcccgaaatc
gtcgaactggccgccgcgcgcaagcccgatctgctcattaccgtcgacaacgggatcgcg
agcgtcgcgggcgtcgaagccgcgaatgcgcgcggcatcgacgtgctcgtgaccgaccac
cacctgcccggcgacgcgctgcccgccgcgcgcgcgatcgtcaacccgaatcagcccggc
tgcacgttcccgagcaagcacatcgcgggcgtcggcgtgatgttctacgtgctgctcgcg
ctgcgcgccgagctgcgccgccgcggcgcgttcgcgagcaaggaagccgaaccgcgcctc
gacgggctgctcgacctcgtcgcgctcggcaccgtcgcggacgtggtgcggctcgacggc
aacaaccgcgtgctcgtcgcgcaagggctgcagcgcatccgcaacggccgcatgcaaccg
ggtgtggccgcgctattccgcgccgccggccgcgaaacgcgcaccgcgtcgggcttcgac
ctcggcttcggcgtcggcccgcgcctgaacgccgccgggcggctctccgacatgtcgctc
ggcatcgaatgcctgatcaccgacgacatcggtcgtgcgtgggagctcgcgcagcagctc
gacgcgatgaatcgcgagcgccgcgagatcgaggccggcatgcagcagcaggcgctcgcc
gatctcgccgccctcgatccggccgacgcatgcacgatcacgctgttcaatcccgcatgg
caccagggcgtgatcggcatcgtggccgggcggctcaaggagaaattccaccgcccgtcg
ttcacgttcgcgcatgcggacgacgccggcgcgcgggtcaagggctcgggccgctcgatc
cccggcttccacctgcgcgatgcgctcgacctcgtgtccaagcgcgagcccgacctgatc
gtcgcgttcggcggccacgcgatggccgcgggcctcacgctcgacaccgccaacgtaccg
cgcttcgcagccgcgttcgaggcggttgcgcgcgagtggctgtccgacgatgcgctcgcg
cgcgtaatagagaccgacggcgagctggaggaagcgtatttcacgccgcagttcgtcggg
ctgctcgacgaagcggtctggggccagggctttccggccccgcttttttccggcgaattc
gatgtggtgtcgcagtcgctcgtgaaggaaaagcacctgaagctgcagttggcacgcggc
cgccagcgtttcaacgccatctggttcaaccacaccgacccgctgccggcgagcgcgttg
attgcgtaccgcctcgtggccgacacgtggaacggcgtgacgcgcgtgcagctggtcgtc
gagcacgccgcaggctga
DBGET
integrated database retrieval system
