Burkholderia cenocepacia DWS 37E-2: DM40_2953
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Entry
DM40_2953 CDS
T03488
Name
(GenBank) ribonuclease, Rne/Rng family domain protein
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcew03019
]
DM40_2953
03009 Ribosome biogenesis [BR:
bcew03009
]
DM40_2953
Messenger RNA biogenesis [BR:
bcew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DM40_2953
Ribosome biogenesis [BR:
bcew03009
]
Prokaryotic type
rRNA processing factors
DM40_2953
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DUF3632
Motif
Other DBs
NCBI-ProteinID:
AIO41746
LinkDB
All DBs
Position
1:3186537..3188006
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AA seq
489 aa
AA seq
DB search
MNEEILINLTPQETRVALVQQGAVQELHVERTLSRGRVGNIYLGKVVRVLPGMQSAFIDI
GLERAAFLHVADIWHPRLAGEPQSGAPHQPIEKTVFEGQTLMVQVIKDPIGTKGARLSTQ
VSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTAVIPPDEKGGYIVRTIAEDATSD
ELAGDVAYLRKTWATIVAQAQRMPATSLLYQDLDLAQRVLRDFANDDTTRIQVDSRETYQ
RLAEFAAEFTPAVSPKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLMIDQTEAM
TTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGIIIIDFIDMENAEHRDAV
LSELKKALSRDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPTCQGKGQVKTSRTV
CYDILREILRESRQFNPREFRVIAAQQVIDLFLDEESQHLAMLIDFIGKPVSLQVESNLS
QEQYDIVLM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagaaatcctgatcaacctcacgccgcaggaaacgcgggtcgcactcgtgcag
caaggcgcggtgcaggagcttcacgtcgagcgcacgctgtcgcgcgggcgggtcggcaac
atctacctcggcaaggtcgtgcgcgtgctgcccggcatgcaatcggcgttcatcgacatc
ggcctcgaacgcgcggcgttcctgcacgtcgcggacatctggcatccgcgcctcgcgggc
gagccgcagtcgggcgcgccgcaccagccgatcgagaagaccgtgttcgaaggccagaca
ctgatggtccaggtgatcaaggatccgatcggcacgaagggcgcgcggctgtcgacgcag
gtcagcatcgcgggccgcacgctcgtgtacctaccgcaggagccgcacatcggcatctcg
cagaagatcgagagcgaagccgagcgcgaggccgtgcgtgcgcggctgaccgccgtgatc
ccgccggacgagaaaggcggctacatcgtgcgcacgatcgccgaggatgcgacgtccgac
gaactggccggcgacgtcgcgtacctgcgcaagacctgggcgacgatcgtcgcgcaggcg
cagcgaatgccggcgacgagcctgctgtatcaggatctcgacctcgcgcagcgcgtgctg
cgcgacttcgcgaacgacgacaccacacgcatccaggtcgactcgcgcgaaacctaccag
cgcctcgcggaattcgcggccgagttcacgccggcggtgagcccgaagctgcatcactac
accggcgagcggccgctgttcgacctgtacaacatcgagacggagatccagcgtgcgctg
tcgcgccgcgtcgatctgaagtccggcggctatctgatgatcgaccagaccgaggcgatg
acgacgatcgacgtgaataccggcggctacgtcggcgcgcgcaatttcgacgacacgatc
ttcaagaccaacctcgaggccgcgcacacgatcgcgcggcaactgcggctgcgcaacctc
ggcgggatcatcatcatcgacttcatcgacatggagaacgccgagcatcgcgacgcggtg
ctgtccgagctgaagaaggcgctgtcgcgcgaccgcacgcgcgtgacggtcaacggcttt
tcgcaattggggctcgtggagatgacccgcaagcgcacgcgcgaatcgctcgcgcacgtg
ctgtgcgaaccctgcccgacctgccagggcaagggtcaggtgaagacgtcgcgcaccgtc
tgctacgacatcctgcgcgagatcctgcgcgagtcgcgccagttcaatccgcgcgaattc
cgcgtaatcgccgcgcagcaggtgatcgacctgttcctcgacgaggaatcgcagcatctc
gcgatgctgatcgacttcatcggcaagcctgtgtcgctgcaggtcgagtcgaatctgagc
caggagcaatacgatatcgtgctgatgtaa
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