Burkholderia cenocepacia DWS 37E-2: DM40_296
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Entry
DM40_296 CDS
T03488
Name
(GenBank) hypothetical protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Pathway
bcew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DM40_296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bcew03019
]
DM40_296
Enzymes [BR:
bcew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DM40_296
Messenger RNA biogenesis [BR:
bcew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DM40_296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
P-loop_SecA
Ric8
Sacchrp_dh_NADP
Cas3-like_C_2
DegT_DnrJ_EryC1
CMS1
CARD_2
Motif
Other DBs
NCBI-ProteinID:
AIO41714
LinkDB
All DBs
Position
1:320089..321525
Genome browser
AA seq
478 aa
AA seq
DB search
MSFESLGLAEPLVKAVNELGYTSPTPIQQQAIPAVLGGGDLLAGAQTGTGKTAGFTLPIL
QRLHTFYAEHRGAKRAVRALILTPTRELAAQVEESVRAYSKYLKLRSTVMFGGVSINPQI
DALKRGVDIVVATPGRLLDHMQQKTIDLSDLDILVLDEADRMLDMGFIHDIKRVLAKLPP
QRQNLLFSATFSDEIKSLADSLLDSPALIEVARRNTTAESVAQKIHPVDRDRKRELLTHL
IREHNWFQVLVFTRTKHGANRLAEQLTKDGISAMAIHGNKSQSARTRALAEFKNSTLQVL
VATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGATGEAVSLVCVDEKQLLRD
IERLIKREIPQEVIAGFEPDPNAKPEPIQQRRGQQPRGGGGGNRQPRAGGSGQPAAKRDG
NAQPKAAKPAKPRAAAGTGGNATGGGRPSGAGNGARPANGNAAHANRNRSSRSGQRGH
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgaatctctcggcctggccgaaccgcttgtgaaggcggtcaacgagctcggc
tacacgtcgccgactcctatccagcagcaggcgatccccgccgtcctcggcggcggcgac
ctgctcgccggcgcacagaccggcaccggcaagaccgccggcttcacgctgccgatcctg
cagcgcctgcacacgttctacgccgaacatcgcggcgcgaagcgcgcggtgcgcgcgcta
attctcacgccgacgcgcgaactggccgctcaggtcgaggaaagcgtgcgtgcgtacagc
aagtacctgaagctgcgctcgaccgtgatgttcggcggcgtcagcatcaatcctcagatc
gatgcgctcaagcgcggcgtcgacatcgtcgtcgcgacgccgggccgcctgctcgaccac
atgcagcaaaagacgatcgacctgtcggatctcgacatcctcgtgctcgacgaagcggac
cggatgctcgacatgggctttatccacgacatcaagcgcgtgctcgcgaagctgccgccg
cagcgccagaatctgctgttctcggccacgttctccgacgaaatcaagtcgctcgccgac
agcctgctcgattcgccggcgctgatcgaagtcgcacgccgcaacaccaccgcggaaagc
gtcgcgcagaagatccacccggtcgaccgcgatcgcaagcgcgagctgctcacgcacctg
atccgcgaacacaactggttccaggtgctcgtgttcacgcgcaccaagcacggcgcgaac
cggcttgccgagcaactgacgaaggacggcatcagtgcgatggcgatccacggcaacaag
agccagtcggcgcgcacgcgtgcgctcgcggaattcaagaacagcacgctgcaggtgctc
gtcgcaaccgacatcgccgcacgcgggatcgacatcgaccagctgccgcacgtcgtcaac
ttcgacctgccgaacgtgccggaagactacgtgcaccggatcggccgcacgggccgcgcg
ggcgcgaccggcgaagcggtgtcgctcgtgtgcgtcgacgagaagcagctgctgcgcgac
atcgagcggctgatcaagcgcgagattccgcaagaagtgatcgcgggcttcgaaccggat
ccgaatgcgaaaccggagccgatccagcagcgtcgcggccagcagccgcgcggcggtggc
ggcggcaatcgccagccgcgtgcgggcggctcaggccagccggccgcgaagcgcgatggc
aatgcgcagccgaaggccgcgaagccggccaagccgcgcgcggccgccggcacgggcggt
aacgccaccggcggcggtcgcccgtccggcgccggcaacggcgcgcgtcccgcgaacggc
aatgccgcgcacgcgaaccgcaaccgttcgtcgcgcagcggccagcgcggtcactga
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