Burkholderia cenocepacia DWS 37E-2: DM40_3354
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Entry
DM40_3354 CDS
T03488
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Pathway
bcew03030
DNA replication
bcew03430
Mismatch repair
bcew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DM40_3354
03430 Mismatch repair
DM40_3354
03440 Homologous recombination
DM40_3354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcew03032
]
DM40_3354
03400 DNA repair and recombination proteins [BR:
bcew03400
]
DM40_3354
Enzymes [BR:
bcew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DM40_3354
DNA replication proteins [BR:
bcew03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DM40_3354
DNA repair and recombination proteins [BR:
bcew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DM40_3354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
AIO38344
LinkDB
All DBs
Position
2:complement(401564..402181)
Genome browser
AA seq
205 aa
AA seq
DB search
MQTVAVLDFETTGLSPNMGDRATEIAVILLRDGEIVDRYQSLMNAGRRIPSDLVALTGIT
NEMIASAPPVSKVMKEAAAFVGSHPVVAHNAGFDKRFWQAELGMLGMAADHAFACTMLVA
RRVYPDARSHRLSSLADMLRLPQTGRAHRAMVDAEIASHLWCRMQRDIGATYGLTQVDHG
LMSRLQTTSKAKVATFFGSLGARAR
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccgtagcggtactcgacttcgaaacaaccgggctttctccgaacatgggagac
agagcgaccgaaatcgccgtgatcctgctgcgcgacggcgagatcgtcgaccgctaccag
agcctcatgaacgctgggcgccgcattccgtccgaccttgtcgcgcttaccggcatcacg
aacgaaatgatcgcgtcggcgccgccggtgtcgaaggtgatgaaagaggccgccgcgttc
gtcggcagtcatccggtcgtcgcgcacaacgccggtttcgacaagcgcttctggcaggcc
gaactcgggatgctcgggatggcggccgaccatgcgttcgcgtgcacgatgctcgtcgcg
cggcgcgtctacccggatgcgcgcagccaccggctgtcgagcctcgccgacatgttgcgc
ctgccgcagacgggccgcgctcaccgcgcgatggtcgacgcggagattgcgagccatctg
tggtgccggatgcagcgcgacatcggcgcgacgtacggactgacgcaagtcgatcacggg
ctcatgtcgcgcctgcagacgacgagcaaggcgaaggtcgcgacgttcttcggttcgctg
ggcgcacgcgcgcgctga
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