Burkholderia cenocepacia DWS 37E-2: DM40_3512
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Entry
DM40_3512 CDS
T03488
Name
(GenBank) hypothetical protein
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bcew03009
]
DM40_3512
Enzymes [BR:
bcew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DM40_3512
Ribosome biogenesis [BR:
bcew03009
]
Prokaryotic type
rRNA helicases
DM40_3512
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
AAA_22
P-loop_SecA
YjeF_N
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AIO38725
LinkDB
All DBs
Position
2:complement(578659..580056)
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AA seq
465 aa
AA seq
DB search
MTQPTATPFSALPLTPAALANLAQLGYVDMTPIQAASLPIALAGHDLIAQAKTGSGKTAA
FSLALLARLDARRFDVQAMILCPTRELADQVAQEVRRLARAEENVKVLTLCGGTPMRPQA
QSLEHGAHIVVGTPGRIMDHLDRGNLKLDALNTLVLDEADRMLDMGFFDDIAKVARQCPT
TRQTLLFSATYPDGIAKLSQQFLRNPKEVKLEERHDNSKIRQRFYEVTETERLHAVGQLL
NHYRPVSTIAFCNTKQQCRDLLDVLHAQGFHALALHGELEQRERDQVLIQFANRSCSVLV
ATDVAARGLDIAQLEAVINVDVTPDPEVHVHRIGRTGRADQEGWALSLASMDEMGRVGAI
EQAQKREVEWHSLAELKPTGTDTLLPPMETLQILGGRKDKIRPGDVLGALTGDAGFDGKQ
IGKINVTEFSTYVAIERGVARDALRKLNAGKIKGKRVKVRLMDDE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
ttgacgcaaccgaccgccacgccgttcagcgcgctgccgctgacgcccgccgcgctcgcg
aacctcgcgcagctcggctatgtcgacatgacgccgattcaggccgcgagcctgccgatc
gcgctcgccggccatgacctgatcgcgcaggcgaagacgggcagcggcaagaccgccgcg
ttctcgctcgcgctgctcgcgcgcctcgacgcgcgccgcttcgacgtgcaggcgatgatc
ctgtgcccgacgcgcgaactcgccgaccaggtcgcacaggaagtgcgccgcctcgcgcgc
gcagaagaaaacgtgaaggtgctgacgctgtgcggcggcacgccgatgcgcccgcaggcg
cagagcctcgaacacggcgcgcacatcgtcgtcggcacgccgggccgcatcatggatcac
ctcgaccgcggcaacctgaagctcgatgcgctcaacacgctcgtgctcgacgaagccgac
cggatgctcgacatgggcttcttcgacgacatcgcgaaggtcgcgcggcagtgcccgacc
acgcgccagacgctgctgttctcggcgacctatccggacggcatcgcgaagctgagtcag
caattcctgcgcaatccgaaggaagtgaagctcgaggagcgccacgacaacagcaagatc
cgccagcgcttctacgaagtgacggaaaccgagcggctgcacgcggtcggccagctgctg
aatcactaccggccggtcagcacgatcgcattctgcaacaccaagcagcaatgccgcgac
ctgctcgacgtgctgcacgcgcagggattccatgcgctcgcgctgcacggcgaactcgaa
cagcgcgagcgggaccaggtgctgatccagttcgcgaaccgcagctgctcggtgctggtc
gcaaccgacgtcgcagcgcgcgggctcgacatcgcgcagcttgaagcggtgatcaacgtg
gacgtgacgcccgaccccgaagtgcacgtgcaccgcatcggccgcactggccgcgcggat
caggaaggctgggcgctgagcctcgccagcatggacgagatgggccgggtcggcgcgatc
gagcaggcgcagaagcgcgaggtcgaatggcattcgctcgcggaactgaagccgaccggc
accgatacgctgctgccgccgatggaaacgctgcagattctcggcggccgcaaggacaaa
atccgcccgggcgacgtgctcggcgcgctgaccggcgacgccgggttcgacggcaagcag
atcggcaagatcaacgtgaccgagttctcgacctatgtcgcgatcgagcgcggcgtcgcg
cgcgatgcgctgcgcaagctcaatgcggggaagatcaagggcaagcgggtcaaggtccgg
ttgatggacgacgagtga
DBGET
integrated database retrieval system
