Burkholderia cenocepacia DWS 37E-2: DM40_3720
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Entry
DM40_3720 CDS
T03488
Name
(GenBank) sigma-54 interaction domain protein
KO
K14414
transcriptional regulatory protein RtcR
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bcew03000
]
DM40_3720
Transcription factors [BR:
bcew03000
]
Prokaryotic type
Other transcription factors
Others
DM40_3720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA
AAA_5
Mg_chelatase
AAA_16
AAA_22
MCM
AAA_30
AAA_7
AAA_19
NACHT
AAA_33
AAA_2
BrxC_BrxD
T2SSE
TniB
AAA_14
ATPase_2
DUF2612
Motif
Other DBs
NCBI-ProteinID:
AIO39993
LinkDB
All DBs
Position
2:836484..838100
Genome browser
AA seq
538 aa
AA seq
DB search
MRKTVAIGFLGTVLDQGGRTPRRYRKWRPTVSLCMQPELAIDRLELLHPPSYARLANQVR
DDLAQLSPHTEVRLTPVTIQDPWDFEEVYATLHDFARAYPFDVEHEDYLLHITTGTHVAQ
ICWFLLAEARYLPARLVQTGPPKQTDEGPSGPGTISVIDLDLSRYNRIAQRFTRERDETV
SFLKAGIATRNARFNALIEQLERVAVRSRAPMLLVGPTGAGKSFLAKRVYELKRGRHRLA
GPFIEINCATLRGDAAMSTLFGHVKGAFTGAQSARAGLLRAADGGLLFLDEIGELGLDEQ
AMLLKAIEEKRFLPVGADVEATSDFQLIAGTHRDLRQMVAAGTFREDLYARINLWTYELP
GLAERREDIEPNLEFELDRFGREHGEQVRFNVEAKRRYLAFAASSRAAWTGNFRELSASI
TRMATLADAGRITEAVAAQEVERLTRTWSLPGGAGAPDACVDVVFGARAAELDLFDRAQL
ERVLDVCRTSASLSEAGRTLFAVSRQNKKQPNDADRLRKYLARFGLDWDGVRRALEGV
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaagaccgtcgcgatcggctttctcggtaccgtgctcgaccagggcggccgcacg
ccgcgccgttaccgcaagtggcggccgaccgtgtcgctctgcatgcagcccgagctcgcg
atcgaccggctcgagttgctgcatccgccgagctacgcgcggctcgccaatcaggtgcgc
gacgatctcgcgcagttgtcaccgcacaccgaggtgcggctcacgcctgtcacgatccaa
gacccgtgggacttcgaggaggtctacgcgacgctgcacgacttcgcgcgcgcgtatccg
ttcgacgtcgagcacgaggactacctgctgcacatcacgacgggcacgcacgtcgcgcag
atctgctggttcctgctggcggaagcgcgttacctgcccgcgcgccttgtgcagacgggg
ccgccgaagcagaccgacgaaggcccgagcgggccggggacgatctcggtgatcgatctc
gacctgtcgcgctacaaccggatcgcacagcgcttcacgcgcgagcgcgacgaaacggtg
tcgttcctgaaggccggcatcgcgacgcgcaacgcgcgtttcaacgcgctgatcgagcag
ctggaacgcgtcgccgtgcgttcgcgcgcgccgatgctgctcgtcgggccgacgggggcc
ggcaagtcgttcctcgcgaaacgcgtgtatgagctgaagcgcggccgtcatcggctcgcg
gggccgttcatcgagatcaactgcgcgacgctgcgcggcgacgcggcgatgtcgacgctg
ttcggtcacgtgaagggcgcgttcaccggcgcgcagtccgcgcgcgcgggcctgctgcgt
gcggccgacggcggcctgctgtttctcgacgaaatcggcgaactcgggctcgacgagcag
gcgatgttgctgaaggcgatcgaggagaagcgtttcctgcccgtcggcgcggacgtcgag
gcgaccagcgatttccagctgatcgcgggcacgcatcgcgatctgcggcagatggtggcg
gccggcacgttccgcgaggatctgtatgcgcggatcaatctgtggacctacgaattgccg
gggttggccgaacgccgtgaggacatcgaaccgaacctcgagttcgaactcgaccgtttc
ggccgcgagcacggcgagcaggtgcggttcaacgtggaagcgaagcggcgctatctcgcg
ttcgcggcgtcgtcgcgcgcggcgtggaccggtaacttccgcgagctgtccgcatcgatc
acgcggatggcgacgctcgcggatgcggggcgaattaccgaagcggttgccgctcaggaa
gtcgagcggctgacgcgtacgtggtcgttgccgggcggtgccggtgcgccggatgcgtgc
gtcgacgtggtgttcggtgcgcgtgcggcggaactcgacttgttcgaccgtgcgcaactc
gaacgcgtgctcgacgtgtgccgcacgtcggcgagcctgtcggaagccgggcgtacgctg
ttcgcggtgtcgcggcagaacaaaaagcagccgaacgatgcggaccggctgcgcaagtat
ctcgcgcggttcgggctcgattgggacggtgtgcggcgcgcactcgagggcgtgtga
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