Burkholderia cenocepacia DWS 37E-2: DM40_3881
Help
Entry
DM40_3881 CDS
T03488
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Pathway
bcew03030
DNA replication
bcew03410
Base excision repair
bcew03420
Nucleotide excision repair
bcew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DM40_3881 (polA)
03410 Base excision repair
DM40_3881 (polA)
03420 Nucleotide excision repair
DM40_3881 (polA)
03440 Homologous recombination
DM40_3881 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bcew03032
]
DM40_3881 (polA)
03400 DNA repair and recombination proteins [BR:
bcew03400
]
DM40_3881 (polA)
Enzymes [BR:
bcew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DM40_3881 (polA)
DNA replication proteins [BR:
bcew03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DM40_3881 (polA)
DNA repair and recombination proteins [BR:
bcew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DM40_3881 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DM40_3881 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DUF748
Motif
Other DBs
NCBI-ProteinID:
AIO39445
LinkDB
All DBs
Position
2:1031505..1034258
Genome browser
AA seq
917 aa
AA seq
DB search
MPEERNLEGKTLLLVDGSSYLYRAYHAMPDLRGPGGEPTGALYGIINMLRRMRKEVSAEY
SACVFDAKGKTFRDDLYADYKANRPSMPPDLALQVEPIHGAVRALGWPLLMVDGVEADDV
IGTLAREAERHGMNVIVSTGDKDLAQLVTDHVTLVNTMTNETLDRDGVIAKFGVPPERII
DYLALIGDTVDNVPGVEKCGPKTAVKWLSQYESLDGVIEHADEIKGVVGDNLRRALDFLP
LGRKLVTVDTACDLAPHLESIEASLKTDGEARDLLRDIFARYGFKTWLREVDNAPAEGGG
ADAPEGDPAPVVATDIVREYDTIQTWEQFDAWYAKIDAAALTAFDTETTSLDPMTARLVG
LSFAVEPGKAAYLPVAHRGPDAPEQLPFDDVLARLKPWLESADRKKVGQHLKYDAQVLAN
YDIALNGIEHDTLLESYVLESHRTHDMDSLALRHLGVKTIKYEDVAGKGAKQIGFDEVAL
DQAAAYAAEDADITLQLHHAMYPQVAREPGLERVYREIEMPVSLVLRKMERTGVLIDDAL
LHAQSNEIATRLIELESQAYELAGGEFNLGSPKQIGQIFFEKLQLPVVKKTPSGAPSTDE
EVLQKLAEDYPLPKLLLEHRGLSKLKSTYTDKLPRMVNPATGRVHTNYAQAVAVTGRLAS
NDPNLQNIPVRTAEGRRIREAFIASPGHRIVSADYSQIELRIMAHISGDASLLRAFAQGE
DIHRATAAEVFGVTPLEVNADQRRIAKVINFGLIYGMSAFGLASNLGITRDAAKLYIDRY
FARYPGVAQYMEDTRTAAKDKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGT
AADLIKLSMIAVDDWLTRDRLASRMIMQVHDELVLEVPDDELSLVREKLPEMMCGVAKLK
VPLVAEVGAGANWEEAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaaatctggaaggtaagaccctgctattggttgacggttcgagctat
ctgtatcgggcttaccatgcgatgcctgatttgcgtggccctggcggggagccgaccgga
gcgctctacggaatcatcaacatgctgcgccgtatgcgcaaggaagtcagtgcagagtat
agcgcttgcgtgttcgatgcaaagggcaagacgttccgcgacgacctttatgctgactat
aaggcaaaccgtccgtcgatgccgcccgatctcgcgctgcaggtcgagccgatccatggc
gcggtgcgcgcgctcggctggccgctgctgatggtcgacggcgtcgaagccgacgacgtg
atcggtacgctcgcgcgcgaagccgagcggcacgggatgaacgtgatcgtgtccaccggc
gacaaggatcttgcgcaactcgtcaccgatcatgtcacgctcgtgaacacgatgacgaac
gagacgctcgatcgcgacggcgtgatcgcgaagttcggcgtgccgccggagcggatcatc
gactatctcgcgttgatcggcgacaccgtcgacaacgtgccgggcgtcgagaagtgcggg
ccgaagacggccgtgaagtggctgtcgcagtacgagagcctcgatggcgtgatcgagcac
gcggacgagatcaagggcgtggtcggcgacaacctgcggcgcgcgctcgatttcctgccg
ctcggccgcaagctcgtgaccgtcgacacggcgtgcgatctcgcgccgcacctcgaatcg
atcgaagcgtcgctgaagacggacggcgaagcacgcgacctgctgcgcgacatcttcgcg
cgctacggcttcaagacgtggctgcgcgaagtcgacaacgcacctgccgagggcggcggc
gccgatgcgccggaaggcgatcccgcgccggtggtggcgacggacatcgtgcgcgaatac
gacacgatccagacctgggagcagttcgacgcgtggtacgcgaagatcgatgcggccgct
ctgaccgcgttcgacaccgaaaccacgtcgctcgatccgatgaccgcacggctcgtcggc
ctgtcgttcgcggtcgagcccggcaaggctgcgtatctgccggtcgcgcatcgcggcccg
gacgcacccgagcagctgccgttcgacgacgtgcttgcgcgccttaagccgtggctcgaa
tcggccgatcgcaagaaggtcggccagcatctgaagtacgacgcgcaggtgctcgcaaac
tacgatatcgcgctgaacggcatcgaacacgacacgctgctcgaatcgtatgtgctcgaa
tcgcaccgcacgcacgacatggacagcctcgcgctgcgtcatctcggcgtgaagacgatc
aagtacgaagacgtggccggcaagggcgcgaagcagatcggcttcgacgaggtcgcgctc
gatcaggccgctgcctatgcggccgaagacgcggacatcacgctgcagctgcatcacgcg
atgtatccgcaggtcgcgcgcgaaccgggcctcgagcgcgtgtatcgcgagatcgagatg
ccggtgtcgctcgtgctgcgcaagatggagcgcactggcgtgctgatcgacgacgcgctg
ctgcacgcgcaaagcaacgagatcgcgacgcggctcatcgagctcgagagccaggcgtac
gaactggccggcggcgagttcaatctcggctcgccgaagcagatcgggcagatcttcttc
gagaagctgcagttgccggtcgtgaagaagacgccgagcggcgcgccgtccaccgacgag
gaagtgctgcagaagctcgccgaggattacccgctgccgaagctgctgctcgagcatcgc
gggctgtcgaagctgaaatcgacgtacaccgacaagctgccgcgcatggtcaatccggca
acgggccgcgtgcacacgaattacgcgcaggccgtcgcggtcacgggccggcttgcatcg
aacgaccccaatcttcagaacattccggtgcgcacggccgaagggcggcgaatccgcgaa
gcattcatcgcatcgccgggccaccggatcgtgtcggccgactattcgcagatcgaactg
cggatcatggcgcacatctccggtgacgcgtcgctgctgcgcgcgttcgcgcagggcgag
gacatccaccgcgcgacggccgccgaagtgttcggcgtgacgccgctggaagtgaacgcc
gaccagcgccggatcgcgaaggtgatcaacttcgggctgatctacgggatgagcgctttt
ggcctcgcgtcgaacctcggcattacgcgcgatgcggcgaaactctatatcgaccgctat
ttcgcgcgctaccccggcgtcgcgcaatacatggaagacacgcgcaccgccgcgaaagac
aagggctacgtcgaaaccgttttcggccgccgcctgtggctgccggagatcaacggcggc
aacgggccgcgccgtcaggccgccgagcgcgcggcgatcaacgcaccgatgcagggcacc
gcggccgacctgatcaagctgtcgatgatcgcggtggacgactggctcacgcgcgaccgg
ctcgcgtcacggatgatcatgcaggtgcacgacgaactggtgctcgaggtgcccgacgac
gaactgtcgctcgtgcgcgagaagctgccggaaatgatgtgcggcgtcgccaagctgaag
gtgccgctggttgccgaggtgggtgccggcgcgaattgggaagaggcgcactga
DBGET
integrated database retrieval system
