Burkholderia cenocepacia DWS 37E-2: DM40_399
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Entry
DM40_399 CDS
T03488
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bcew
Burkholderia cenocepacia DWS 37E-2
Pathway
bcew03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bcew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DM40_399 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bcew03400
]
DM40_399 (mutM)
Enzymes [BR:
bcew01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DM40_399 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DM40_399 (mutM)
DNA repair and recombination proteins [BR:
bcew03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DM40_399 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
RNHCP
Motif
Other DBs
NCBI-ProteinID:
AIO40472
LinkDB
All DBs
Position
1:complement(434470..435297)
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AA seq
275 aa
AA seq
DB search
MPELPEVEVTRRGIAPFVAGRRVERVDVRTAMLRWPVPAGLAEQLRAREVLAVERRGKYL
LFEVDAGWFIVHLGMTGTLRVLPAAGVPVAAKHDHIDWIFDEFVLRFRDPRRFGAVLWHP
REAGDVHAHPLLASLGVEPFSSAFTGALLHARTRGRTVSVKQALLAGDMVVGVGNIYASE
SLFRAGIRPTTAAGKVSLPRYERLADAVRATLADAIERGGSTLRDFVGSNGESGYFQLDC
FVYDRAGLPCRVCGTPIRQIVQGQRSTYFCPTCQR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttgccagaagtcgaagtcacgcgcaggggcatcgcgccctttgtcgcgggc
cgccgcgtcgagcgtgtcgacgtccgcaccgcaatgctgcgctggcccgtgccggccggg
ctcgccgagcaattgcgcgcacgcgaggtgctcgccgtcgagcgtcgcggcaagtacctg
ctgttcgaggtcgacgccggctggttcatcgtccatctcgggatgacgggcacgctgcgc
gtgctgcccgcggccggcgtgccggttgccgcgaaacacgatcacatcgactggatcttc
gacgaattcgtgctgcggttccgcgatccgcgccgtttcggcgcggtgctgtggcacccg
cgcgaagcgggcgacgtgcatgcgcatccgctgctcgcaagcctcggcgtcgagccgttc
tcgtccgcgttcaccggtgcgctcctgcatgcacgcacgcgcggccgcacggtatcggtc
aagcaggcgctcctcgccggcgacatggtcgtcggcgtcggcaatatctatgcatcggag
agcctgtttcgcgccggcatccggccgacgaccgccgccggcaaggtttcgctgccgcgc
tacgagcggctcgccgacgcagtgcgcgcgacgctcgccgatgcgatcgagcgcggcggc
agcacgttgcgcgatttcgtcggcagcaacggcgaaagcggatatttccagctcgactgc
ttcgtctatgaccgcgccggactgccttgccgcgtgtgcggcacgccgatccgtcagatc
gtgcagggtcagcgttcgacctatttctgcccgacctgccagcgttga
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